| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0096 |
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| Symbol | |
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| ID | 5170526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 88551 |
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| End bp | 89372 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640562595 |
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| Product | aminotransferase, class IV |
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| Protein accession | YP_001243701 |
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| Protein GI | 148269241 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.198329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGATAT GGTGGAGGGG AAAGTTTCAG CGCGCGGATG AAATTTCGCT GGATTTCTCC
CTGTTTGAAA AGTCGCTTCA GGGGGCAGTG TACGAAACCT TGAGAACTTA CAATGGAATC
CCGTTTGCAG CTTACAAACA TTATTCCAGA TTGAAGAGAT CTGTCGATTT CTTTAAAATC
CCCTTTTCTT TGAGTTTTGA TGAGTTTTCA GAAGTGCTGA AGACAGGTGC TCAGGAATTC
AAACAGGAAG TGAGAATCAA GGTCTATCTT TTTCCTGATT CCGGGGAGAT CTTTTTTGTG
TTCTCACCCT TCAATGTGCC GGATGTGGAG TCAGGAGTTG ATGTGAAAAT ATCGAGCGTT
CGAAGAATAC CTGATCTCTC CACCCCACCG GCTCTCAAAA TAACTGGACG TACCGACATA
GTGCTTGCAA GAAGGGAAAT AGTGGACTGC TACGATGTAA TTCTGCTTGG TTTGAACGGG
CAGGTTTGTG AGGGAAGTTT CAGCAATGTG TTTTTGGTGA AAGAAGGCAA ATTGGTTACA
CCTTCGCTCG ACAGCGGTAT TCTGGATGGC ATCACGCGGG AGAATGTGAT AAAACTTGCA
AAAAGTCTTG AAATACCTGT TGAAGAAAGA GTGGTTTGGG TTTGGGAACT GTTCGAAGCG
GATGAAATGT TTCTCACACA CACGAGTGTG GGAGTGGTTC CTGTTAGAAG GTTGAACGAG
CACTTATTCT TTGAGGAAGA ACCAGGACCC GTGACAGCGA CTTTGATGGA AAACTTTGAG
CCTTTTATCT TAAACCTTGA AGAAAACTGG GTGGGAATAT GA
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| Protein sequence | MLIWWRGKFQ RADEISLDFS LFEKSLQGAV YETLRTYNGI PFAAYKHYSR LKRSVDFFKI
PFSLSFDEFS EVLKTGAQEF KQEVRIKVYL FPDSGEIFFV FSPFNVPDVE SGVDVKISSV
RRIPDLSTPP ALKITGRTDI VLARREIVDC YDVILLGLNG QVCEGSFSNV FLVKEGKLVT
PSLDSGILDG ITRENVIKLA KSLEIPVEER VVWVWELFEA DEMFLTHTSV GVVPVRRLNE
HLFFEEEPGP VTATLMENFE PFILNLEENW VGI
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