Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0085 |
Symbol | |
ID | 5170005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 76612 |
End bp | 77373 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640562584 |
Product | response regulator receiver protein |
Protein accession | YP_001243690 |
Protein GI | 148269230 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000252622 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTCCAA CGGTTATGGT AGTGGATGAA TCCAGAATCA CCTTCCTTGC CGTCAAAAAT GCCCTTGAAA AAGACGGTTT CAATGTGATT TGGGCAAAAA ACGAGCAGGA AGCGTTCACG CTCCTTCGCC GCGAAAAGAT CGATCTCGTG TTCGTAGATG TGTTCGAAGG TGAAGAGAGC CTGAATTTGA TAAGAAGAAT ACGTGAAGAG TTTCCCGACA CGAAGGTCGC GGTTCTGAGC GCCTACGTTG ACAAAGATCT AATTATTAAT TCGGTGAGAG CGGGTGCGAT TGACTACATT CTCAAACCCT TCAAGCTCGA TTATCTCTTG GAAAGAGTCA AAAAAATCAT TTCTTCCGCA CCCAGGCTCA CCGTTTCTCT CAAGAAAAAT ATCGAGGATC TTGAGATCAC CCTCAAGTTC GAAGATATCG TGAGAAAAGA AATAAAGCGT TCCAACAGGA CAGGTTCTCG TTTCTGCGTC ATGTACGTTA AGTTCGAAGA TATCATGAGA GACTACGAGA CTATCAAGAA ATTCTTCAGG GAAACAGATT ACATCCTACC CATCTCTGCC AGCGAATACC TGTTTGTACT GACACTGACG GGAAAACACG GAATAGAGGC CGTTACAAAG AGGATGAAAG AGAAACTTTC CGAACGTTTC AGCTACACGT ACGTGTGTTA CCCGGACGAT GGTAAAACCT ATGAGGAAAT CATTTTAACT CTGAAAGATA GAATGTCCAA ACCAAGGGGG AATGAGAGTT GA
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Protein sequence | MTPTVMVVDE SRITFLAVKN ALEKDGFNVI WAKNEQEAFT LLRREKIDLV FVDVFEGEES LNLIRRIREE FPDTKVAVLS AYVDKDLIIN SVRAGAIDYI LKPFKLDYLL ERVKKIISSA PRLTVSLKKN IEDLEITLKF EDIVRKEIKR SNRTGSRFCV MYVKFEDIMR DYETIKKFFR ETDYILPISA SEYLFVLTLT GKHGIEAVTK RMKEKLSERF SYTYVCYPDD GKTYEEIILT LKDRMSKPRG NES
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