| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0083 |
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| Symbol | |
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| ID | 5170177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 75249 |
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| End bp | 75704 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640562582 |
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| Product | hypothetical protein |
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| Protein accession | YP_001243688 |
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| Protein GI | 148269228 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000837778 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTAA GAATAGCGGT GGTTGGGAAA CTGGACGGTT TTATCAAAGA AGGTATAAAG
CACTACGAAA AGTTCTTGAG ACGATTTTGT AAGCTTGAAG TTCTCGAAAT AAAGCGAGTT
CACAGAGGAA GCATCGAAGA AATCGTCAGG AAGGAAACAG AGGATCTGGC AAACAGGATT
CTCCTCGGAA GTTTTGTTAT GGTCATGGAT AGGAGAGGGG AGGAAGTTTC TTCAGAGGAG
TTTGCCGACT TTCTCAAAGA TCTGGAAATG AAGGGAAAGG ATATAACGAT CCTGATAGGT
GGGCCCCATG GGTTGAATGA GGAGATCTTC GCGAAGGCCC ACCGTGTTTT TTCATTATCG
AAAATGACCT TTACACATGG TATGACCGTT CTGATAGTTC TGGAGCAGAT ATTCAGAGCG
TTTAAAATAA TCCATGGGGA AAACTATCAC TATTGA
|
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| Protein sequence | MKVRIAVVGK LDGFIKEGIK HYEKFLRRFC KLEVLEIKRV HRGSIEEIVR KETEDLANRI
LLGSFVMVMD RRGEEVSSEE FADFLKDLEM KGKDITILIG GPHGLNEEIF AKAHRVFSLS
KMTFTHGMTV LIVLEQIFRA FKIIHGENYH Y
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