| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0067 |
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| Symbol | |
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| ID | 5170352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 60814 |
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| End bp | 62211 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640562565 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_001243672 |
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| Protein GI | 148269212 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGGAG ACAGAGTAAG ACTCGTAGTG GTTCTACTGG TACTGGCTGG CGCTCTGCTC
GCCATCTTTT GGCCCAGTAA AGGAGGATGG ATATCCAATA TTCGTCTTGG TTTGGATATA
AAAGGTGGTG CAAGGATCGA ATACATGGTT GAAGTTCTTC AGGAAACGGA AAATCCTTCC
GATGTTGTGG ATGACGTGTG GACTGTGTTG AGAAACAGGC TCGATGCGGC TGGTTACACA
GAAGCAGCTG TGAATAAAGT ACTCCGGGAT AACAAATACT ACATAGTGGT GGAAATACCC
GGAGCGACCG ACACGGTCCA GGCAGAAAAG TTGATCGGAT CGACGGGTGT CCTTTATTTT
GCTCAGGTTC TCGATGAGTA CCTCGGTGAA GATCCCAGCA AAGTACCTGA ACTTTCCCTT
GAAGCCAGAA GAGAGAACGC GGTATGGCTC AAAGGAAGAG ACGGAAAGTG GTACCTCGTG
AAAAAAGAGA TAATGGGTAG GAAAGACCTG GTTCTTGAAG CTCCAAGAAT CGTGTATGCA
AGACCGGAAG TGGAGACAAG AACTGGAAGA TACGGCTACA AGGTCTCTTT TGAGCTTTCA
AAAGAGTATG TTGATGTGTT CAAGAGGATC ACACAGGCGC TGTACGTTCC CGAAGGGACC
TACGATCCAA AGAAGAGACT CGCCATAGTG CTCGATAACG TTGTTCAGTT CGCTGGTCAG
GTAGTTGCAA TCATAACTGA TGGGAAGGCA GAGATAACAG GTAACTTCTC ACTGGAAGAA
GCGAAACAAC TCGCTGCCAT TCTGAGAAGC GGTGCACTTC CCGCAAGGCT CGTAAAAACC
TCTTCGGGAT GGGTTGCACC ACTCCTTGGA CGTGATGTGA TCGATGCCTC CCTGAAAGCG
GGAATAATCG GACTCATACT CGTTCTCGCT TACATGATCA TCTATTACAG AACGATGGGA
ATAGTCGCCG ATCTTGCGCT CATTTACAAC ACCGTACTGC TTCTTGGTGT GATGGCGGCC
GGCAAATTCA TCCTCACCCT CCCTGGAATA GCTGGTATCA TCCTCACTAT AGGAACGACC
GTCGATGGAA ACGTGATCAT ATACGAAAGG ATAAAAGAAG AGATGAGGTT GGGTAAACCT
GTTAAAACTT CCATAGCGGC TGGTTTTGAT AGATCGCTTT CAACGATACT TGATGCGAAC
ATCACGACGA TACTCACAGG TCTCATCCTC TACTATTTTG GCACCGGAAC CATCAAAGGC
TTTGCCATCA CTCTGATCAT CGGTGTACTT GGCAGTATCT TTGTGAATCT GGTGTTCAGC
CGTCTGCTTC TCGATGCACT TGCGCGCTTC ATAAAACCCT TCAGAGCCGG TGAGGCACAG
GGAGGGACCG GACAATGA
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| Protein sequence | MRGDRVRLVV VLLVLAGALL AIFWPSKGGW ISNIRLGLDI KGGARIEYMV EVLQETENPS
DVVDDVWTVL RNRLDAAGYT EAAVNKVLRD NKYYIVVEIP GATDTVQAEK LIGSTGVLYF
AQVLDEYLGE DPSKVPELSL EARRENAVWL KGRDGKWYLV KKEIMGRKDL VLEAPRIVYA
RPEVETRTGR YGYKVSFELS KEYVDVFKRI TQALYVPEGT YDPKKRLAIV LDNVVQFAGQ
VVAIITDGKA EITGNFSLEE AKQLAAILRS GALPARLVKT SSGWVAPLLG RDVIDASLKA
GIIGLILVLA YMIIYYRTMG IVADLALIYN TVLLLGVMAA GKFILTLPGI AGIILTIGTT
VDGNVIIYER IKEEMRLGKP VKTSIAAGFD RSLSTILDAN ITTILTGLIL YYFGTGTIKG
FAITLIIGVL GSIFVNLVFS RLLLDALARF IKPFRAGEAQ GGTGQ
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