Gene Tpet_0063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0063 
Symbol 
ID5170369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp57474 
End bp58316 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content46% 
IMG OID640562561 
Productribonuclease Z 
Protein accessionYP_001243668 
Protein GI148269208 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID[TIGR02650] ribonuclease Z, Thermotoga type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.715887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCA TAGGGTTTTC GAAGGCGCTG TTTTCCACCT GGATCTATTA TTCGCCGGAG 
CGCATACTTT TCGATGCGGG AGAAGGAGTC TCCACGATTC TTGGAAGTAA GGTGTACGCC
TTCAAATACG TCTTTCTCAC TCATGGGCAC GTGGATCACA TAGCGGGATT GTGGGGAGTT
GTGAACATAA GGAACAACGG TATGGGAGAC AGAGAAAAGC CACTCGACGT TTTTTATCCA
AGGGGAAACA GAGCCGTGGA GGAGTACACC GAATTCATAA AGAGAGCAAA CCCCGATCTC
AGATTCTCTT TCAACGTTCA CCCTTTGAAG GAAGGTGAGA AGGTTTTTCT GAGGGACGCA
GGGGGATTCA AAAGGTATGT TCAGCCGTTC AGAACGAAAC ACGTTTCCTC CGAAGTGAGC
TTTGGTTATC ACATATTCGA AGTTAGAAGA AAATTGAAGA AAGAATTCCA AGGATTGGAC
AGCAAAGAAA TCTCACGTCT TGTAAAAGAA AAAGGCAGAG ACTTCGTCAC TGAAGAATAC
CACAAAAAGG TTCTCACTAT CAGCGGGGAC TCGCTGGCGC TCGATCCTGA GGAGATTCGT
GGAACGGAAT TGCTCATCCA CGAGTGTACT TTCCTGGACG CACGCGACCG AAGGTACAAG
AACCACGCTG CCATAGACGA AGTGATGGAG TCTGTGAAAG CAGCGGGTGT CAAAAAAGTC
ATTCTCTACC ACATTTCCAC CCGTTACATA AGACAGCTCA AGTCGGTCAT AAAAAAATAC
AAGGAGGAAA TGCCTGATGT AGAGATCCTT TACATGGATC CAAGAAAGGT GTTTGAAATG
TGA
 
Protein sequence
MNIIGFSKAL FSTWIYYSPE RILFDAGEGV STILGSKVYA FKYVFLTHGH VDHIAGLWGV 
VNIRNNGMGD REKPLDVFYP RGNRAVEEYT EFIKRANPDL RFSFNVHPLK EGEKVFLRDA
GGFKRYVQPF RTKHVSSEVS FGYHIFEVRR KLKKEFQGLD SKEISRLVKE KGRDFVTEEY
HKKVLTISGD SLALDPEEIR GTELLIHECT FLDARDRRYK NHAAIDEVME SVKAAGVKKV
ILYHISTRYI RQLKSVIKKY KEEMPDVEIL YMDPRKVFEM