Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0063 |
Symbol | |
ID | 5170369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 57474 |
End bp | 58316 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640562561 |
Product | ribonuclease Z |
Protein accession | YP_001243668 |
Protein GI | 148269208 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | [TIGR02650] ribonuclease Z, Thermotoga type |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.715887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATCA TAGGGTTTTC GAAGGCGCTG TTTTCCACCT GGATCTATTA TTCGCCGGAG CGCATACTTT TCGATGCGGG AGAAGGAGTC TCCACGATTC TTGGAAGTAA GGTGTACGCC TTCAAATACG TCTTTCTCAC TCATGGGCAC GTGGATCACA TAGCGGGATT GTGGGGAGTT GTGAACATAA GGAACAACGG TATGGGAGAC AGAGAAAAGC CACTCGACGT TTTTTATCCA AGGGGAAACA GAGCCGTGGA GGAGTACACC GAATTCATAA AGAGAGCAAA CCCCGATCTC AGATTCTCTT TCAACGTTCA CCCTTTGAAG GAAGGTGAGA AGGTTTTTCT GAGGGACGCA GGGGGATTCA AAAGGTATGT TCAGCCGTTC AGAACGAAAC ACGTTTCCTC CGAAGTGAGC TTTGGTTATC ACATATTCGA AGTTAGAAGA AAATTGAAGA AAGAATTCCA AGGATTGGAC AGCAAAGAAA TCTCACGTCT TGTAAAAGAA AAAGGCAGAG ACTTCGTCAC TGAAGAATAC CACAAAAAGG TTCTCACTAT CAGCGGGGAC TCGCTGGCGC TCGATCCTGA GGAGATTCGT GGAACGGAAT TGCTCATCCA CGAGTGTACT TTCCTGGACG CACGCGACCG AAGGTACAAG AACCACGCTG CCATAGACGA AGTGATGGAG TCTGTGAAAG CAGCGGGTGT CAAAAAAGTC ATTCTCTACC ACATTTCCAC CCGTTACATA AGACAGCTCA AGTCGGTCAT AAAAAAATAC AAGGAGGAAA TGCCTGATGT AGAGATCCTT TACATGGATC CAAGAAAGGT GTTTGAAATG TGA
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Protein sequence | MNIIGFSKAL FSTWIYYSPE RILFDAGEGV STILGSKVYA FKYVFLTHGH VDHIAGLWGV VNIRNNGMGD REKPLDVFYP RGNRAVEEYT EFIKRANPDL RFSFNVHPLK EGEKVFLRDA GGFKRYVQPF RTKHVSSEVS FGYHIFEVRR KLKKEFQGLD SKEISRLVKE KGRDFVTEEY HKKVLTISGD SLALDPEEIR GTELLIHECT FLDARDRRYK NHAAIDEVME SVKAAGVKKV ILYHISTRYI RQLKSVIKKY KEEMPDVEIL YMDPRKVFEM
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