Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0061 |
Symbol | |
ID | 5170225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 56108 |
End bp | 57025 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640562559 |
Product | band 7 protein |
Protein accession | YP_001243666 |
Protein GI | 148269206 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00313093 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGATAG CTCTTGTTGT TCTGGTTTTC TTCCTGATCG TACTGGCTGC GAGTTCTATA AGGATCGTGC GTCCGTACGA ACGGGGGCTT GTGGAAAGGC TCGGGAAGTT CAAAAGAGAA GTCGGGTCTG GAGTACATTT CATAATTCCC TTCTTCGAGC GAATGATAAA GGTAGACATG AGAGAAAAAG TCATTGATGT TCCTCCACAG GAGGTCATAA CAAGAGATAA CGTGGTTGTG ACGGTAGATG CCGTGATCTA CTACGAGATC ACCGACGCGT ACAGGGTGGT TTACAACGTG AGCAACTTCG AGATGGCCAC CATAAAGCTC GCTCAGACGA ATCTGAGAAA CGTCATAGGT GAACTGGAGC TCGATCAAAC GCTCACATCC AGGGAAAGAA TAAACATGAA GCTTCGAACT GTTCTCGACG AAGCAACGGA CAAGTGGGGT GTGAGAATCA CACGGGTTGA GATCAAAAAG ATAGATCCAC CTCAGGATAT CACCGATGCT ATGAGTAAGC AGATGAAGGC GGAGAGAACA AAAAGAGCGG CCATACTGGA AGCGGAGGGT TACAAACAGG CGGAAATATT GAAAGCAGAA GGTGAGAAAA ACGCGGCCAT TTTGAGAGCA GAGGGTGAAG CGGAAGCCAT AAAGAGAGTC GCAGAAGCGA ACATGCAAAA ACTCATTCTC GAAGCCCGTG GACAGGCTGA GGCGATAAAA CTCGTTTTCA ACGCGATACA CGAAGGAAAT CCGACCAAGG ATCTTCTCAC CGTCAGGTAC CTTGAGACGC TGAAGGAAAT GGCTAACGGT CAGGCGACAA AGATATTCCT CCCATTTGAA GCGAGTTCCA TACTCGCAAG CCTGGGAGCC ATATCTGAAA TTTTCAAAAA GGAAGAAAAC AAGAGGGATG AGAAATGA
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Protein sequence | MLIALVVLVF FLIVLAASSI RIVRPYERGL VERLGKFKRE VGSGVHFIIP FFERMIKVDM REKVIDVPPQ EVITRDNVVV TVDAVIYYEI TDAYRVVYNV SNFEMATIKL AQTNLRNVIG ELELDQTLTS RERINMKLRT VLDEATDKWG VRITRVEIKK IDPPQDITDA MSKQMKAERT KRAAILEAEG YKQAEILKAE GEKNAAILRA EGEAEAIKRV AEANMQKLIL EARGQAEAIK LVFNAIHEGN PTKDLLTVRY LETLKEMANG QATKIFLPFE ASSILASLGA ISEIFKKEEN KRDEK
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