Gene Tpet_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0061 
Symbol 
ID5170225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp56108 
End bp57025 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content47% 
IMG OID640562559 
Productband 7 protein 
Protein accessionYP_001243666 
Protein GI148269206 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00313093 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATAG CTCTTGTTGT TCTGGTTTTC TTCCTGATCG TACTGGCTGC GAGTTCTATA 
AGGATCGTGC GTCCGTACGA ACGGGGGCTT GTGGAAAGGC TCGGGAAGTT CAAAAGAGAA
GTCGGGTCTG GAGTACATTT CATAATTCCC TTCTTCGAGC GAATGATAAA GGTAGACATG
AGAGAAAAAG TCATTGATGT TCCTCCACAG GAGGTCATAA CAAGAGATAA CGTGGTTGTG
ACGGTAGATG CCGTGATCTA CTACGAGATC ACCGACGCGT ACAGGGTGGT TTACAACGTG
AGCAACTTCG AGATGGCCAC CATAAAGCTC GCTCAGACGA ATCTGAGAAA CGTCATAGGT
GAACTGGAGC TCGATCAAAC GCTCACATCC AGGGAAAGAA TAAACATGAA GCTTCGAACT
GTTCTCGACG AAGCAACGGA CAAGTGGGGT GTGAGAATCA CACGGGTTGA GATCAAAAAG
ATAGATCCAC CTCAGGATAT CACCGATGCT ATGAGTAAGC AGATGAAGGC GGAGAGAACA
AAAAGAGCGG CCATACTGGA AGCGGAGGGT TACAAACAGG CGGAAATATT GAAAGCAGAA
GGTGAGAAAA ACGCGGCCAT TTTGAGAGCA GAGGGTGAAG CGGAAGCCAT AAAGAGAGTC
GCAGAAGCGA ACATGCAAAA ACTCATTCTC GAAGCCCGTG GACAGGCTGA GGCGATAAAA
CTCGTTTTCA ACGCGATACA CGAAGGAAAT CCGACCAAGG ATCTTCTCAC CGTCAGGTAC
CTTGAGACGC TGAAGGAAAT GGCTAACGGT CAGGCGACAA AGATATTCCT CCCATTTGAA
GCGAGTTCCA TACTCGCAAG CCTGGGAGCC ATATCTGAAA TTTTCAAAAA GGAAGAAAAC
AAGAGGGATG AGAAATGA
 
Protein sequence
MLIALVVLVF FLIVLAASSI RIVRPYERGL VERLGKFKRE VGSGVHFIIP FFERMIKVDM 
REKVIDVPPQ EVITRDNVVV TVDAVIYYEI TDAYRVVYNV SNFEMATIKL AQTNLRNVIG
ELELDQTLTS RERINMKLRT VLDEATDKWG VRITRVEIKK IDPPQDITDA MSKQMKAERT
KRAAILEAEG YKQAEILKAE GEKNAAILRA EGEAEAIKRV AEANMQKLIL EARGQAEAIK
LVFNAIHEGN PTKDLLTVRY LETLKEMANG QATKIFLPFE ASSILASLGA ISEIFKKEEN
KRDEK