| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0053 |
|---|
| Symbol | |
|---|
| ID | 5170012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 47809 |
|---|
| End bp | 48429 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640562551 |
|---|
| Product | peptidase M22, glycoprotease |
|---|
| Protein accession | YP_001243658 |
|---|
| Protein GI | 148269198 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTTC TGGCACTCGA CACTTCCCAG AGAATAAGAA TTGGGTTGAG AAAAGGAGAA
GATCTTTTTG AAATTTCCTA CACAGGTGAG AAAAAACACG CAGAGATTCT TCCTGTTGTT
GTGAAGAAGC TGCTGGACGA ACTAGATTTC AAAGTGATGG ATCTTGATGT CGTGGGAGTT
GGTATTGGTC CTGGAGGATT GACAGGTCTC AGGGTGGGAA TCGCCACTGT GATAGGACTT
GTGTCTCCAT ACGATATACC TGTGGCTCCT CTGAACTCCT TCGAAATGGC TGCAAAAAGT
TGTCCAGTCA GCGGTGTTGT ACTCGTGGTC AGAAGAGCTA GGAAAGGTTA CCACTACTGT
GCGGTTTATC TGAAAGACGA AAATCTCAAT CTGCTGAAAG AGCCGAGTGT GGTCTCTGAC
GAAGAACTGA AAGAGATCAC AAAAGAGTTT TCTCCAAAAA TAGTCCTGAA GGACGACATT
CTCATCTCAC CTGCTGTGCT GGTTGAAGAG AGCGAGAGGC TTTTCAAAGA GAAAAAGACC
ATCCACTACT ACGAAATCGA ACCTTTGTAT CTTCAGAAAT CCATAGCGGA ATTGAACTGG
GAAAAAAAGA AAAGGGGCTA A
|
|---|
| Protein sequence | MNVLALDTSQ RIRIGLRKGE DLFEISYTGE KKHAEILPVV VKKLLDELDF KVMDLDVVGV
GIGPGGLTGL RVGIATVIGL VSPYDIPVAP LNSFEMAAKS CPVSGVVLVV RRARKGYHYC
AVYLKDENLN LLKEPSVVSD EELKEITKEF SPKIVLKDDI LISPAVLVEE SERLFKEKKT
IHYYEIEPLY LQKSIAELNW EKKKRG
|
|---|
| |