| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0037 |
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| Symbol | |
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| ID | 5170015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 31899 |
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| End bp | 33404 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640562535 |
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| Product | peptidase M50 |
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| Protein accession | YP_001243642 |
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| Protein GI | 148269182 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000100693 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTATCG TCTACTTCAT ATTGATATTG ACGGGTGTCA TAATGGTCCA CGAACTCGGC
CACTATCTTT TTGCGAGGCT CTTTAAAGTG AAGGTTCTGG AGTTCGCGAT TGGATTTGGA
CCAAAGATTT TTTCTGTGAA GGGAAGGGAA ACTACCTTCA GACTAAACGT CTTTCCCATA
GGTGGATACG TGAGAATGCT CGGCGAAGAA GGAGAAGAGA TAGCAGACGA GGAAGAGAAA
GAAAAGAGTT TCTACGCGAA ACCCGCTTGG CAGAGATTTC TGATCACCCT TGCGGGTCCT
CTCTTTTCAA TACTCGCGGG TTATCTCCTC TTTCTCCCTA TCACTCTTAA CTGGGGAATC
GCGCTTCCCG GGATAGATGA AGTTGTGCCG GGAAGTCCCG CAGAAGAAGC TGAACTGAGG
CGAGGAGATG TCGTCTATTC CATAAACGGA AAGATCGCTT TCGACACGTC GATCATCTCG
AACGAGATTC AGAAAGGACT GCCTGTTGAA CTGGTTATCA TCAGGAATGG TGAGAAGAAA
TCTCTCAGGT TAATCCCCAG AATGTATCCC GAAACGTACG AGTTCGTTCT CGAAAGTGCA
GAAGGAACTC CTTCGGGAAA ACTCGTCTCA GTTAACGGAA ACAGAGACAC ATCTGTTCTC
AAAGAATTTG TGAACGAATA CGTGGTTCTT GAGTTCGAAG GAGGAACGGT AAAGGGAATT
CTGAAGCAGT TCAACGAAAT TCCGGCCCGA TATATGATCG GAATATCCTT CTCCGGGCTC
GCTCCTGTGT TCAAAAAGGA CATTTATTTT AAAGAAGGGC TTTTCGTCTT TAAAAAGGGA
GATCGTATAG TCCGGGTGGA AGATCAGGAG ATAGAAGGAT GGCAGGATCT GGTGGTGCTT
TATCAGAGGC TGACACTGGG AAAAGACGCC ATGATGGTGA GTTTGCAGGG AAATGATCTC
GAATGGTGGA GAGGACTTTC AGGCAGCGTC AGAGTAGTGA TAAAAAGGGG TGACAGCACG
ATAGAGAAAA ACGTGGAGGC CTCATTTTTG AAGAACATCC TCGAAACGCC CGATCTCTTG
GAGATGGGTG TTCCCCGTTA TAAACCGAAG AATCCTCTGG AAGCGGTGAA TCTTTCTGTG
AAGGCGTGCA ACTATGTGTT ACTGACGACT GCCTCTTCTC TGAAGAACTT CTTCAGGAAT
GTTCAGACAG GACAGATAGT GGGAGTGGTG GGACTGGCGG GCGTGATCAG CGCGGCATCC
AAAACGGGTC TGGAGGCAGT CCTCACAGTT GTGGCCGTGA TAACAATCAG TCTGGGTGTT
TTGAATCTTC TGCCACTTCC GGCGCTCGAT GGTGGTCGCA TTATCTTCTC GCTTGTGGAA
ATGATCACTC GAAAAAGACT CAATCCCCAG GTCGAAAACA TCATTCATTT TCTTGGGTTC
ATCTTTCTCA TGATACTCTT CCTTTACATC ACGTTCCTCG ACATAGGAAG GATGATGGGA
ATATGA
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| Protein sequence | MVIVYFILIL TGVIMVHELG HYLFARLFKV KVLEFAIGFG PKIFSVKGRE TTFRLNVFPI
GGYVRMLGEE GEEIADEEEK EKSFYAKPAW QRFLITLAGP LFSILAGYLL FLPITLNWGI
ALPGIDEVVP GSPAEEAELR RGDVVYSING KIAFDTSIIS NEIQKGLPVE LVIIRNGEKK
SLRLIPRMYP ETYEFVLESA EGTPSGKLVS VNGNRDTSVL KEFVNEYVVL EFEGGTVKGI
LKQFNEIPAR YMIGISFSGL APVFKKDIYF KEGLFVFKKG DRIVRVEDQE IEGWQDLVVL
YQRLTLGKDA MMVSLQGNDL EWWRGLSGSV RVVIKRGDST IEKNVEASFL KNILETPDLL
EMGVPRYKPK NPLEAVNLSV KACNYVLLTT ASSLKNFFRN VQTGQIVGVV GLAGVISAAS
KTGLEAVLTV VAVITISLGV LNLLPLPALD GGRIIFSLVE MITRKRLNPQ VENIIHFLGF
IFLMILFLYI TFLDIGRMMG I
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