Gene Tpet_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0035 
Symbol 
ID5171239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp30266 
End bp30871 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content46% 
IMG OID640562533 
ProductCBS domain-containing protein 
Protein accessionYP_001243640 
Protein GI148269180 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000268631 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCA AAAAATGGGT CACCCAGGAC TTCCCGATGG TTGAAGAATC AGCTACAGTG 
AGAGAATGTC TGCACAGGAT GAGGCAGTAC CAGACGAACG AATGTATTGT CAAAGATCGG 
GAAGGCCACT TCAGAGGAGT GGTGAACAAG GAGGATTTGC TGGATCTGGA TCTCGATTCT 
TCTGTATTCA ATAAAGTTTC CCTTCCGGAC TTTTTCGTCC ACGAAGAAGA CAACATCACC 
CACGCTCTTC TTCTGTTTCT GGAGCACCAG GAGCCTTACC TTCCGGTGGT TGATGAAGAG 
ATGCGCCTCA AGGGTGCTGT GAGTCTTCAT GATTTTCTTG AAGCGCTCAT AGAGGCTCTG 
GCGATGGACG TTCCTGGTAT CCGTTTTTCT GTCCTTCTCG AGGACAAACC TGGAGAGTTG 
AGGAAGGTTG TAGATGCCTT AGCGCTCAGT AACATAAACA TCTTATCCGT TATCACAACA 
AGGTCACAAG ATGGCAAGAG AGAGGTTCTC ATCAAAGTGG ACGCGGTAGA TGAAGGAACA 
CTCATCAAGC TTTTTGAAAG TCTTGGGATA AAAATAGAAT CCATCGAAAA GGAAGAGGGG 
TTCTGA
 
Protein sequence
MKVKKWVTQD FPMVEESATV RECLHRMRQY QTNECIVKDR EGHFRGVVNK EDLLDLDLDS 
SVFNKVSLPD FFVHEEDNIT HALLLFLEHQ EPYLPVVDEE MRLKGAVSLH DFLEALIEAL 
AMDVPGIRFS VLLEDKPGEL RKVVDALALS NINILSVITT RSQDGKREVL IKVDAVDEGT 
LIKLFESLGI KIESIEKEEG F