Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0028 |
Symbol | |
ID | 5170966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 25225 |
End bp | 25890 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640562526 |
Product | hypothetical protein |
Protein accession | YP_001243633 |
Protein GI | 148269173 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000502789 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGGAA AAATAGTTGT GCTGATAAAG AAATGGATAG AGGGTTTTCT TCTTGAATTG AAAGGGCCTT CTGTTGAAGA AGCAGATACT TCTTTTCAAC TTCCAGACGT AAGAGAACAG CCTTTCCAGA ACAAGGTGAA CGTTTTCTCT CTAAAAGAAG AAACAACGGT TCACGAGGGT ACAACAAACC AGCAACAGAT CTCTATAAAA GAATGTTCCC TTGAGAATGA AATACGATGT AAAACAGGAA CTCCAGAAAT TCTAATCTCC GGAATTCACC TTTTTAACCC TGAACTCTCG GACGTATCGT TCCACAGCGA AAACGTTCAT TTCATAGTAG ATGCGAAAAC GATCCCGTCT GAAGAGATGG ATGTTTTCTC AAATACCGAC ATTCCAATCT TGTGGAGAAT GAGAGTAAAA AGAGAGGTGC TCGTCGACAG AAAAAAAATA GAAGGAGCAC TGAAAGTGCT CCTGAATAGT CTGAAAGATA GAAAGATTGA CAGGATCAAA TTTGTCGGTT ATTACAAAAA TGTTCCTGCT GGAAAAATCA GCTTGTTTTC TTCTGATCTT CTCGTTGAGA TCGATAAAGG TCCTTCTAAG AATCTCGTCG TTTTTGAATT AGAAATCAAC GGAGAAAAGA AGCACGTTTT CATCTCTGTT CAATGA
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Protein sequence | MFGKIVVLIK KWIEGFLLEL KGPSVEEADT SFQLPDVREQ PFQNKVNVFS LKEETTVHEG TTNQQQISIK ECSLENEIRC KTGTPEILIS GIHLFNPELS DVSFHSENVH FIVDAKTIPS EEMDVFSNTD IPILWRMRVK REVLVDRKKI EGALKVLLNS LKDRKIDRIK FVGYYKNVPA GKISLFSSDL LVEIDKGPSK NLVVFELEIN GEKKHVFISV Q
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