Gene Tpet_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0023 
Symbol 
ID5170749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp22726 
End bp23340 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content43% 
IMG OID640562521 
ProductCheC, inhibitor of MCP methylation 
Protein accessionYP_001243628 
Protein GI148269168 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000167071 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCT CAGAAAGACA GAAAGATCTT TTGAAAGAAA TAGGAAACAT AGGAGCCGGA 
AACGCTGCCA CGGCGATTTC TTACATGATA AATAAGAAGG TCGAAATCTC CGTTCCAAAT
GTAGAAATTG TACCTATCAG TGATGTCATA TTCGTAGCGA AAAATCCTGA AGAAATAGTC
GTCGGTGTGA AAATGCCTGT AACTGGAGAA ATAGAAGGAA GTGTACTTCT CATAATGGGA
ACTACTGTTG TGAAGAAAAT ACTCGAAATT CTGACAGGCC TGGCTCCCGA CAATCTGTTG
GATCTCGATG AGTTTTCCGC TTCGGCGCTT CAGGAGATAG GGAACATAAT GTGCGGTACT
TACGTTTCAG CTCTCGCGGA TTTTCTTGGT TTCAAGATCG ACACACTTCC CCCACAGCTT
GTCATCGACA TGATATCTGC CATATTCGCA GAAGCTTCCA TAGAAGAGCT GGAAGATAAC
TCGGAAGATC AGATAGTGTT TGTAGAAACG CTTCTGAAGG TGGAAGAGGA AGAGCCTTTG
ACATCCTACA TGATGATGAT ACCAAAGCCG GGATATCTGG CCAAGATCTT CGAAAGGATG
GGGATTCAGG AATGA
 
Protein sequence
MKISERQKDL LKEIGNIGAG NAATAISYMI NKKVEISVPN VEIVPISDVI FVAKNPEEIV 
VGVKMPVTGE IEGSVLLIMG TTVVKKILEI LTGLAPDNLL DLDEFSASAL QEIGNIMCGT
YVSALADFLG FKIDTLPPQL VIDMISAIFA EASIEELEDN SEDQIVFVET LLKVEEEEPL
TSYMMMIPKP GYLAKIFERM GIQE