Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0023 |
Symbol | |
ID | 5170749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 22726 |
End bp | 23340 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640562521 |
Product | CheC, inhibitor of MCP methylation |
Protein accession | YP_001243628 |
Protein GI | 148269168 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000167071 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGATCT CAGAAAGACA GAAAGATCTT TTGAAAGAAA TAGGAAACAT AGGAGCCGGA AACGCTGCCA CGGCGATTTC TTACATGATA AATAAGAAGG TCGAAATCTC CGTTCCAAAT GTAGAAATTG TACCTATCAG TGATGTCATA TTCGTAGCGA AAAATCCTGA AGAAATAGTC GTCGGTGTGA AAATGCCTGT AACTGGAGAA ATAGAAGGAA GTGTACTTCT CATAATGGGA ACTACTGTTG TGAAGAAAAT ACTCGAAATT CTGACAGGCC TGGCTCCCGA CAATCTGTTG GATCTCGATG AGTTTTCCGC TTCGGCGCTT CAGGAGATAG GGAACATAAT GTGCGGTACT TACGTTTCAG CTCTCGCGGA TTTTCTTGGT TTCAAGATCG ACACACTTCC CCCACAGCTT GTCATCGACA TGATATCTGC CATATTCGCA GAAGCTTCCA TAGAAGAGCT GGAAGATAAC TCGGAAGATC AGATAGTGTT TGTAGAAACG CTTCTGAAGG TGGAAGAGGA AGAGCCTTTG ACATCCTACA TGATGATGAT ACCAAAGCCG GGATATCTGG CCAAGATCTT CGAAAGGATG GGGATTCAGG AATGA
|
Protein sequence | MKISERQKDL LKEIGNIGAG NAATAISYMI NKKVEISVPN VEIVPISDVI FVAKNPEEIV VGVKMPVTGE IEGSVLLIMG TTVVKKILEI LTGLAPDNLL DLDEFSASAL QEIGNIMCGT YVSALADFLG FKIDTLPPQL VIDMISAIFA EASIEELEDN SEDQIVFVET LLKVEEEEPL TSYMMMIPKP GYLAKIFERM GIQE
|
| |