Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0022 |
Symbol | |
ID | 5170305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 22040 |
End bp | 22729 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640562520 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_001243627 |
Protein GI | 148269167 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5581] Predicted glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000212001 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTACT ACACAGAGCT CGTAAATGCA AAGGACGTGA TAAAACCAGG TCAAAATGTG ATCGTAGAGG TTTCTGCGCC GGAGGATCTG GAAGGTCAAT ACAAGAGCAG TGTGCACGAC GTGGACTTTG AAAGGGGAAT CCTCACTCTT TCGATGCCGA GTTTTAAAGG AAGATTGGTC CCACTTCCTC GCGGAACCAG GTGTACTGTG ATGATACTGG ACAGCTCTGC GATCTATGTT TTCAGGACGA GTGTGCTTGA AAGTGGTAGA GACGAAGACG GCTTTCCGGT GACAAAAGTA CCGTTTCCCG AAAGATTGAG GAAAATTCAA AGAAGGAGAT TCAAGAGAAT AAAGATATTT CTCGAAGGAA CGTACAGGGT CGCTTCGAGA GATGAACCAC CGAAAAGATT TGTGACGAAG GATTTCAGTG CCGGTGGTAT GCTTATGGTA GCTGAAGATA TCCTGACGCC TGAACAGATC ATATACGTTA CACTCGAACT GGACGAAGAT CTAAAACTCA AGGATCACCC AGCGAGAATC GTGAGAGAAG CGGGCATCCT CGAAACGGGA GAGAGAATGT ACGGCGTAGA ATTTTTGAAC GTTTCCCCGG CTTTGGAGAG AAAACTGGTT AGCTTTGTCT TCAAGAAAGA AATAGAGATG AGAAACAAGG AAAGGAGTGA AAGCGAATGA
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Protein sequence | MEYYTELVNA KDVIKPGQNV IVEVSAPEDL EGQYKSSVHD VDFERGILTL SMPSFKGRLV PLPRGTRCTV MILDSSAIYV FRTSVLESGR DEDGFPVTKV PFPERLRKIQ RRRFKRIKIF LEGTYRVASR DEPPKRFVTK DFSAGGMLMV AEDILTPEQI IYVTLELDED LKLKDHPARI VREAGILETG ERMYGVEFLN VSPALERKLV SFVFKKEIEM RNKERSESE
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