Gene Tpet_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0022 
Symbol 
ID5170305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp22040 
End bp22729 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content46% 
IMG OID640562520 
Producttype IV pilus assembly PilZ 
Protein accessionYP_001243627 
Protein GI148269167 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5581] Predicted glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000212001 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTACT ACACAGAGCT CGTAAATGCA AAGGACGTGA TAAAACCAGG TCAAAATGTG 
ATCGTAGAGG TTTCTGCGCC GGAGGATCTG GAAGGTCAAT ACAAGAGCAG TGTGCACGAC
GTGGACTTTG AAAGGGGAAT CCTCACTCTT TCGATGCCGA GTTTTAAAGG AAGATTGGTC
CCACTTCCTC GCGGAACCAG GTGTACTGTG ATGATACTGG ACAGCTCTGC GATCTATGTT
TTCAGGACGA GTGTGCTTGA AAGTGGTAGA GACGAAGACG GCTTTCCGGT GACAAAAGTA
CCGTTTCCCG AAAGATTGAG GAAAATTCAA AGAAGGAGAT TCAAGAGAAT AAAGATATTT
CTCGAAGGAA CGTACAGGGT CGCTTCGAGA GATGAACCAC CGAAAAGATT TGTGACGAAG
GATTTCAGTG CCGGTGGTAT GCTTATGGTA GCTGAAGATA TCCTGACGCC TGAACAGATC
ATATACGTTA CACTCGAACT GGACGAAGAT CTAAAACTCA AGGATCACCC AGCGAGAATC
GTGAGAGAAG CGGGCATCCT CGAAACGGGA GAGAGAATGT ACGGCGTAGA ATTTTTGAAC
GTTTCCCCGG CTTTGGAGAG AAAACTGGTT AGCTTTGTCT TCAAGAAAGA AATAGAGATG
AGAAACAAGG AAAGGAGTGA AAGCGAATGA
 
Protein sequence
MEYYTELVNA KDVIKPGQNV IVEVSAPEDL EGQYKSSVHD VDFERGILTL SMPSFKGRLV 
PLPRGTRCTV MILDSSAIYV FRTSVLESGR DEDGFPVTKV PFPERLRKIQ RRRFKRIKIF
LEGTYRVASR DEPPKRFVTK DFSAGGMLMV AEDILTPEQI IYVTLELDED LKLKDHPARI
VREAGILETG ERMYGVEFLN VSPALERKLV SFVFKKEIEM RNKERSESE