Gene Tpet_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0020 
SymbolflhF 
ID5170025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp20104 
End bp21240 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content43% 
IMG OID640562518 
Productflagellar biosynthesis regulator FlhF 
Protein accessionYP_001243625 
Protein GI148269165 
COG category[N] Cell motility 
COG ID[COG1419] Flagellar GTP-binding protein 
TIGRFAM ID[TIGR03499] flagellar biosynthetic protein FlhF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000398912 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAA AAAAATACGT TGCTGAGAGC ATCAGAGAAG CGATGATCAT GATAAGAAGA 
GAACTGGGGG AAAACGCCGT TATTTTGAGT TCTCGAAGAA TAAAAAAGGG GGGATTCTTT
GGAATAGGTG GAAAAACGTA CTTCGAAGTG ACAGCTGCGG TTGAGGAAGA GAGAAAGAGA
GAGGAAAACA CGAGTTACAG ACTCCAGGAA ATACTCGTAA AGAATCGACA GAGTTCGAAC
GATAATATCA AAGGGGAGTT CGATGAGATA AAAAGGACGA TAAACGAGAT AAAGCAGATG
CTTGTAACTG AAAAGAGGCA GACTCTACCA GAAGGGCTTT CAAAAATTCT TTACGGTATG
GAGAAACAGG AAATTCTCCC AGAGATCAGA TACAAGCTGA TAGATTTTCT GAGAATGAAG
TTTGGAGATC TGGATCCGAA TTCGAACGAG ACTTTCAAGA TTCTGTCGGA GCAATTCGCA
AACCTTGTGA AGACAAATGC ACCAGATTTC AAAAACGCGA AAGTACTCTT TGTGGGAACA
ACAGGTGTGG GGAAAACAAC TTCACTCGCC AAACTTGCAG CCCGTTTCAA GATAGACGAG
AAAAAACGCG TCGCTATACT GACGCTTGAC ACGTACCGGA TAGCAGCGGC AGAGCAGTTG
AAGATATATG CGGATATCAT GGATATTCCC ATGAAGATCG CCTACACTCC AAAAGAAGCG
GAATACGAAA TGATGGCTCT GAAAGATTAC GATATCGTTC TTGTGGATAC AGCCGGGAGA
AGCCATCAAA ACGATCTTCA GATGAGCGAA CTCAGAGCAC TTTCGGAAGC TGTAAAACCA
AACATCACTT TTCTGGTAAT TTCTATGAAC TACAAACTCG ATGACGTGAA AAGAATCGTT
GAAAGATTCT CCACCGTGAA ACCAACTCAC ATCATTCTCA CCAAAATGGA TGAAACATCG
GTTTACGGAA CATTCGTGAA CATATCGGAA ATCACGGGAC TTCCCATTGC GTTCGTTACA
AACGGACAGA GGGTCCCCGA TGATATATTC GAAGCGAACC CTATGGAGCT TGCCAGGATT
GTCGCCGGTG AGGTGTTGAA TTATGCCAGA TCAAGCGGAA CATCTGAGAA AGACTGA
 
Protein sequence
MKIKKYVAES IREAMIMIRR ELGENAVILS SRRIKKGGFF GIGGKTYFEV TAAVEEERKR 
EENTSYRLQE ILVKNRQSSN DNIKGEFDEI KRTINEIKQM LVTEKRQTLP EGLSKILYGM
EKQEILPEIR YKLIDFLRMK FGDLDPNSNE TFKILSEQFA NLVKTNAPDF KNAKVLFVGT
TGVGKTTSLA KLAARFKIDE KKRVAILTLD TYRIAAAEQL KIYADIMDIP MKIAYTPKEA
EYEMMALKDY DIVLVDTAGR SHQNDLQMSE LRALSEAVKP NITFLVISMN YKLDDVKRIV
ERFSTVKPTH IILTKMDETS VYGTFVNISE ITGLPIAFVT NGQRVPDDIF EANPMELARI
VAGEVLNYAR SSGTSEKD