Gene Tpet_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0013 
Symbol 
ID5171150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp12821 
End bp13462 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content43% 
IMG OID640562511 
Producthypothetical protein 
Protein accessionYP_001243618 
Protein GI148269158 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGGTTTT CCGGAAAGAA AGAACAGACC ATAATCTCCC TCTTTTTTAA ACACATCGAC 
AAAGTCGAAG AAACTCTGGA ATGCGTCTTC AAACTCTTAA AAAAGTATCT TGAAGATGCT 
GACGATATCG AGTCTCTTTA TCTTCGGGCA CAAAGGCTTG AAAGCGAAGC CGATCGATTA 
CGCCGAAAAA CAGAGATGGA AATGTACAGT GGAGCGTTCC TGCCGAATTT TAGAGGAGAC 
CTTCTTGGTT TGATTGAATC CGTAGACAAG GTGGCGAACA AAGCCGAATA CGTGGCGGAT 
TTGATTGTTC TTCAAAAACC AGAAGTTCCC CACCAATTGA AGGATCTCAT TCTGATGCAG 
ATGGAATACT CTCTGAAGGC CTACGAATCC CTGAAAAGTG CTCTCAGATT TTTGTTCGAA 
GATCTCGAGA GAGTTGAAGA GTTCGTTCTT GCCGTGGAGA AATACGAACA CGAAGAAGAT 
AATGTGGAGC GAACAGCTCT CAGGAAGCTT TTCGAGATGG ACATCGAAAG TTGTGTAAAA 
CTCGAGTTGA AAGAGTTGAT AAGGAGTATA GGGGACATAG CCGACAGAAC GGAGGACGTA 
TCTGATAGAG CAGAAATCAT TCTTCTGAAA AGGAGGTTCT GA
 
Protein sequence
MWFSGKKEQT IISLFFKHID KVEETLECVF KLLKKYLEDA DDIESLYLRA QRLESEADRL 
RRKTEMEMYS GAFLPNFRGD LLGLIESVDK VANKAEYVAD LIVLQKPEVP HQLKDLILMQ 
MEYSLKAYES LKSALRFLFE DLERVEEFVL AVEKYEHEED NVERTALRKL FEMDIESCVK 
LELKELIRSI GDIADRTEDV SDRAEIILLK RRF