Gene BBta_7872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7872 
SymbolmsrA 
ID5152167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp8262117 
End bp8262773 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID640562496 
Productmethionine sulfoxide reductase A 
Protein accessionYP_001243603 
Protein GI148259018 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTCA TGCGCAAATC CCCTGTCTTG CCGACCGCCG CCGACGCGCT GCCCGGCCGT 
ACCCAGCCGA TCCCGACGGC GCCGACCCAT TTCGTCAATG GCCGCCGGCT CTTGCCGCCC
TATCCCGCCG GCCTTGAGCA GGCCGTTTTC GGGCTCGGCT GCTTCTGGGG CGCCGAGCGC
AAATTCTGGC AGCTTGGCGA CGGCGTCCAC GTCACCGCCG TGGGCTATGC CGGCGGCCAC
ACGCCGAACC CGACCTATGA GGAAGTGTGC TCGGGGCTGA CGGCGCATAC CGAGGTCGTC
CTGGTGGTGT TCGATCCCAA GGTCATCTCC TATGAGCGCC TGCTGAAGAC GTTCTGGGAG
AGTCATGACC CGACCCAGGG CATGCGCCAG GGCAACGATG TCGGCACGCA ATATCGCTCG
GCGATCTACA CTTTCAGCGA TGCGCAGCGC GAGACGGCGG ACGCGTCGAA GGCCGCCTAT
GAGACAGCGC TCCGTGCCAA GGGGCTCGGG GCCATCACGA CGGAGATCGC GCCGGCAGGC
CCGTTCTATT TCGCCGAGGA TTATCATCAG CAATATCTGG CGAAGAATCC GGCCGGCTAT
TGTGGGCTCG GCGGCACCGG CGTGGCGTGT CCGATCGGCG TCGGTGTCAC TGCCTAG
 
Protein sequence
MFFMRKSPVL PTAADALPGR TQPIPTAPTH FVNGRRLLPP YPAGLEQAVF GLGCFWGAER 
KFWQLGDGVH VTAVGYAGGH TPNPTYEEVC SGLTAHTEVV LVVFDPKVIS YERLLKTFWE
SHDPTQGMRQ GNDVGTQYRS AIYTFSDAQR ETADASKAAY ETALRAKGLG AITTEIAPAG
PFYFAEDYHQ QYLAKNPAGY CGLGGTGVAC PIGVGVTA