Gene BBta_7870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7870 
Symbol 
ID5152165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp8260194 
End bp8260865 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content65% 
IMG OID640562494 
Productputative carboxymethylenebutenolidase 
Protein accessionYP_001243601 
Protein GI148259016 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACAGG ACATCAAGCT CGCTGCGGCA GACGGCTTTC AGCTCGGCGC TTACCGGGCA 
GATCCGGCGG GAACGCCAAA GGGCGCCCTT GTCGTCATCC AGGAGATCTT CGGCGTCAAT
CATCACATCC GCAATGTCTG TGACCGGCTC GCCGCCGAAG GCTATGTCGC GGTGGCACCC
GCGATCTTCG ACCGCATCGA ACCCGACTTC ACGTCAGGCT ACTCCCCTGA TGAAATCGCC
GTGGCGCGGA AATTCGTCGC CAATCCGGAT TGGCCTGCCA TGCTGCGCGA CACCCAGGCC
GCGATCGACG CGGTGAAGGA TGTGGCCGCG GTCGGGATCA TCGGCTTTTG CCTCGGCGGC
AGCATCGCCT ATGCGGCGGC GACCAAACTG ACCGGGTTGA AGGCCGCGGT CGGCTATTAT
GGCGGCGCCA TCGTGCGCTT CGCCGATGAC AAGCCCACTG TCCCCACCCA GCTGCATTTC
GGCGAGAAGG ATGCCGGCAT TCCCTTGGCC GACGTCGACG CTATCAAGGC CAAGCGCCCC
GACGTCGAGA TCTTCGTCTA TCCCGGCGCC CAGCACGGCT TCGGCTGCGA TGAGCGCGCG
AGCTACGACA AGCCGAGCGC CGATCTCGCC TGGACGCGCA GCCTCGCCTT CTTCGCGCAG
CATCTGCGTT GA
 
Protein sequence
MGQDIKLAAA DGFQLGAYRA DPAGTPKGAL VVIQEIFGVN HHIRNVCDRL AAEGYVAVAP 
AIFDRIEPDF TSGYSPDEIA VARKFVANPD WPAMLRDTQA AIDAVKDVAA VGIIGFCLGG
SIAYAAATKL TGLKAAVGYY GGAIVRFADD KPTVPTQLHF GEKDAGIPLA DVDAIKAKRP
DVEIFVYPGA QHGFGCDERA SYDKPSADLA WTRSLAFFAQ HLR