Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7870 |
Symbol | |
ID | 5152165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 8260194 |
End bp | 8260865 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640562494 |
Product | putative carboxymethylenebutenolidase |
Protein accession | YP_001243601 |
Protein GI | 148259016 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGACAGG ACATCAAGCT CGCTGCGGCA GACGGCTTTC AGCTCGGCGC TTACCGGGCA GATCCGGCGG GAACGCCAAA GGGCGCCCTT GTCGTCATCC AGGAGATCTT CGGCGTCAAT CATCACATCC GCAATGTCTG TGACCGGCTC GCCGCCGAAG GCTATGTCGC GGTGGCACCC GCGATCTTCG ACCGCATCGA ACCCGACTTC ACGTCAGGCT ACTCCCCTGA TGAAATCGCC GTGGCGCGGA AATTCGTCGC CAATCCGGAT TGGCCTGCCA TGCTGCGCGA CACCCAGGCC GCGATCGACG CGGTGAAGGA TGTGGCCGCG GTCGGGATCA TCGGCTTTTG CCTCGGCGGC AGCATCGCCT ATGCGGCGGC GACCAAACTG ACCGGGTTGA AGGCCGCGGT CGGCTATTAT GGCGGCGCCA TCGTGCGCTT CGCCGATGAC AAGCCCACTG TCCCCACCCA GCTGCATTTC GGCGAGAAGG ATGCCGGCAT TCCCTTGGCC GACGTCGACG CTATCAAGGC CAAGCGCCCC GACGTCGAGA TCTTCGTCTA TCCCGGCGCC CAGCACGGCT TCGGCTGCGA TGAGCGCGCG AGCTACGACA AGCCGAGCGC CGATCTCGCC TGGACGCGCA GCCTCGCCTT CTTCGCGCAG CATCTGCGTT GA
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Protein sequence | MGQDIKLAAA DGFQLGAYRA DPAGTPKGAL VVIQEIFGVN HHIRNVCDRL AAEGYVAVAP AIFDRIEPDF TSGYSPDEIA VARKFVANPD WPAMLRDTQA AIDAVKDVAA VGIIGFCLGG SIAYAAATKL TGLKAAVGYY GGAIVRFADD KPTVPTQLHF GEKDAGIPLA DVDAIKAKRP DVEIFVYPGA QHGFGCDERA SYDKPSADLA WTRSLAFFAQ HLR
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