| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7855 |
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| Symbol | |
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| ID | 5151052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 8244242 |
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| End bp | 8246188 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640562479 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_001243586 |
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| Protein GI | 148259001 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.126864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACA AGCCGCGGCG GCCCGTCGGC AAATCTCCGG GCAAACCCGG GTCGTCCCAT
TCCCAGACGA CGGCTGATGC CCTGTGCGCT GCCGCCGTGC GGCTGCTGCG AGCTGGCGAC
CTGGTGCAGG CGGAGGACTC CTGCCGTCGC GCGCTCAGCC TCGATGCCGG CTCCGTCGAT
GCGCTTCGCG CGATGGGCCA GGTCTGTCTC GCGCTCAAGC GCTTCGATGA TGCGATCGAA
TGGTTCGCTC GGGCGATCAG GCTCGACATC TCCGTACCGG AGTCCCTGAT CGGTCTTGCC
GAGGCGCTGC GGTCGGCCGG CCGGCTCGAC GACGCCATCA AGGCGTATGA TCGTGTGCTG
CAGCTGCGGC CGGATGCGCA GGACTGCTGG GACGCGCTCG GCGAGCTGCT GCAGCGGACT
GGCCGGTATG CCGAGGCGGC GCTGGCCTGC GATCGCCTGT TGCAGCTCGC GCCCGATCGC
GCAACGACGT GGTTTCGTCT CGGCGAGGTG CTCGAAGCTC AGGACCGCCG TGACGAGGCG
GCCCTGGCGT TCGATCAGGT GCTGAAAGCC ACGCCCGATC ATGTCGACGC CGCCAACAAG
GCCGGCGCGG TTCATTTCGA TGCCGGACGC TATGACGAGG CGATCGCGCG GTTCGACCGG
TCGCTCGCCG TCCGTCCGGA CCAGGCCGGC GTGCTCTGCC TCAAGGCCAT CGCGCTGCGG
CGGCTGCGCC GCTACCAGGA TGCGCAGCCC TGCGGGCAGC GCGCGCATGT GCTGGCACCG
CATGATCCCG ACATCGCCAA CAGCTATGGC TGCATCCTGC AGAATCTCGG CCGGCACGAC
GAGGCCGTCG CCGTGTTCGA CAAGGCCATC GCGCTGCGGC CGCAGACCGC GGAGTTCTAT
AATCACCGCG GCACCTCGCT GGCCGAGCTG CATCGCTTTG ATGAGGCGTT CGCGAGCTTC
GATCGCGCCG TGGCGCTGAA GCCGGATCTT GCCGATGCGC ATTGGAACGC CGCGTTGTTC
CGGCTGCTGA CCGGCGATTT CGCTCGCGGC TGGGCCGCGC GCGAATGGGG GCGCCAATGC
CGCGCGGTCG GCTTCGTCGA GCGCAGCTTC GACGTGCCGC TGTGGCTGGC TGACGCGCCG
CTCGCGGGGA AGACGATCCT GCTGCATAGC GACGAGGGGC TGGGCGACAC GATCCAGTTC
GCGCGCTACG CCACGCTGGT CGCCGCGCAG GGCGCGCGCG TCGTGCTCGA GGTCGACGCG
GTGCTGCAGC CGCTGTTGTC GGGGCTGAAT GGCGTGGCCC AATGTCTTGC CCGCGGCATC
GATGCCGTGC CTGCGATCGA CTATCATTGC CCGTTGTCGA GCCTGCCGCT CGCGTTTGCG
ACCGGCCTGG ACACCATCCC GGCCGTGCCG CGCTATCTGC CGCCTGCTCC GGCAGAGCGG
CTGGCGGCGT GGGAGCAACG GCTCGGCCGG CACGACAAGC TCCGGGTCGG CTTGGTGTGG
TCCGGCAATC CCGCCCATCT CAACGACCAC AATCGCTCGA TGCCGCTGGC CACGTTGGAG
CCGTTGCTGG ACCGCGATGT GCGCTTCATC AGCCTGCAGA AGGAGCCGCG CCCGCACGAC
AAGGTGCAGC TCGAGCGGCG TAGCGACATT CTCGATCTCA CCGCCGAGAT CCGCGATTTC
GTCGACACAT CCGCGCTGAT CGACAGCCTC GACCTCGTCA TCACCGTCGA CACCAGCGTT
GCGCATCTCG CCGGCGCGCT CGGCAAGCCG ACCTGGATCA TGCTGCCCTA TACGCCGGAC
TATCGCTGGC TGCTCGGGCG GGACGACAGT CCCTGGTATC CGAGCGTACG GCTGTTCCGC
CAGGACGCGC GCCGCGACTA TGTCGATGTC GTCGCCCGGA TCGCTGAGGC GCTTGTGGCG
CAGGCCGCAG GCTTCACCCC CGAATAG
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| Protein sequence | MKHKPRRPVG KSPGKPGSSH SQTTADALCA AAVRLLRAGD LVQAEDSCRR ALSLDAGSVD
ALRAMGQVCL ALKRFDDAIE WFARAIRLDI SVPESLIGLA EALRSAGRLD DAIKAYDRVL
QLRPDAQDCW DALGELLQRT GRYAEAALAC DRLLQLAPDR ATTWFRLGEV LEAQDRRDEA
ALAFDQVLKA TPDHVDAANK AGAVHFDAGR YDEAIARFDR SLAVRPDQAG VLCLKAIALR
RLRRYQDAQP CGQRAHVLAP HDPDIANSYG CILQNLGRHD EAVAVFDKAI ALRPQTAEFY
NHRGTSLAEL HRFDEAFASF DRAVALKPDL ADAHWNAALF RLLTGDFARG WAAREWGRQC
RAVGFVERSF DVPLWLADAP LAGKTILLHS DEGLGDTIQF ARYATLVAAQ GARVVLEVDA
VLQPLLSGLN GVAQCLARGI DAVPAIDYHC PLSSLPLAFA TGLDTIPAVP RYLPPAPAER
LAAWEQRLGR HDKLRVGLVW SGNPAHLNDH NRSMPLATLE PLLDRDVRFI SLQKEPRPHD
KVQLERRSDI LDLTAEIRDF VDTSALIDSL DLVITVDTSV AHLAGALGKP TWIMLPYTPD
YRWLLGRDDS PWYPSVRLFR QDARRDYVDV VARIAEALVA QAAGFTPE
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