Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7848 |
Symbol | |
ID | 5151264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 8235914 |
End bp | 8237044 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640562472 |
Product | putative ABC transporter (permease protein) |
Protein accession | YP_001243579 |
Protein GI | 148258994 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00792305 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.174905 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCGCT CGCTGTCCAA TATCTTCTGG CTCGGCACCA AGGAGCTGCG CAGCCTGTTC GGCGACGTCG TGCTGATCGG GCTCGTGATC TACTCGTTCA CGGTGGCGGT GATCAGCCAG GCGCAGAGCA GCTCCCAGGA GCTGCACCGC GCCTCGATCG CCGTCGTCGA CGAGGACAAT TCCGAGCTGT CGCGCCGCAT CGCAGCTGCA TTCCTGCCGC CTTATTTTCA GCGCCCCATC TCCATCACCC AGCGCGAGGT CGAGCCGCTG ATGAACAGCG GCCGCTTCAC CTTCGTCCTC GACATTCCGC CGAATTTCCA GCGCGACGTT CTCGCCGGGC GCAAGCCGTC GGTGCAGGTC AATGTCGACG CCACCGCGAT GATCCAGGCC GGGATCGGCT CGGGCTATGC GCTCCAGATC ATCACGACCG AGGTGGCCTG GTTCGTCGCC CGCTCGGAGG TCCCGGTGCA GGCGCCGGTC AATCTGGTGA CGCGGATCGC CTTCAATCCC AACATCACCA CCGCCTGGTT CGAGGGCGTG ATGGGCATCA TCAACAGCGT CACCATGCTG GCCATCATCC TGGCCGGCGC GGCGCTGGTG CGCGAGCGCG AGCATGGCAC GATGGATCAT CTCCTGGTGA TGCCGCTCTC GCCCTTCGAG ATCGCGATGT CGAAGATCTG GGCCAATGCG CTGGTCATCG CGGTCGCCGT TGCAGTGGCT CTCTACGTCG TCGTGCGTTG GTATCTGCAG GTTCCGATCA ACGGGTCTGT TCCGCTCTTT CTCTCCGGGA CAGTGCTCTA TCTGTTCTTC GCCACCGCCG TGGGTCTTTT TCTCGGCACC ATCGCGCGAT CGATGCCGCA ACTCGGCCTG CTCTACATCC TGGTGGCGGT GCCGATGAAC CTGTTGTCCG GTGCGATGAC GCCGGTCGAA AGCCAGCCGG TCTGGCTCGC CACGATCATG CAGGCGTCGC CGTCGACCCA CTTCGTGTCC TTCGCGCAGT CGATCCTGTA TCGCGGCGCC GGGCTCGATG TGGTCTGGCC GCAATTTCTG GCGGTGGCCG GCATCGGCGC GCTGGTCCTG GCGCTCACCT TGCGCCGCTT CCGGGCGGCC ATCGCTGCGG CTGGCGCGTG A
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Protein sequence | MVRSLSNIFW LGTKELRSLF GDVVLIGLVI YSFTVAVISQ AQSSSQELHR ASIAVVDEDN SELSRRIAAA FLPPYFQRPI SITQREVEPL MNSGRFTFVL DIPPNFQRDV LAGRKPSVQV NVDATAMIQA GIGSGYALQI ITTEVAWFVA RSEVPVQAPV NLVTRIAFNP NITTAWFEGV MGIINSVTML AIILAGAALV REREHGTMDH LLVMPLSPFE IAMSKIWANA LVIAVAVAVA LYVVVRWYLQ VPINGSVPLF LSGTVLYLFF ATAVGLFLGT IARSMPQLGL LYILVAVPMN LLSGAMTPVE SQPVWLATIM QASPSTHFVS FAQSILYRGA GLDVVWPQFL AVAGIGALVL ALTLRRFRAA IAAAGA
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