| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7846 |
|---|
| Symbol | |
|---|
| ID | 5151262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 8233309 |
|---|
| End bp | 8234667 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640562470 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001243577 |
|---|
| Protein GI | 148258992 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.346388 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGCAT GGGACGATTT CACCCAGTCG GCGACGGCCG CGCGGCGCTC GCTGGCGCAG
GCGCGATCGG GGCAGATTCC GCCGTTCCTG ATGCTGTCGG TGCCCGGAAT GAGCGCGCGC
GAGCATCGTC GCTGTTCCGA GCTGTGGGTG CGGGATCGCG TCGCGGCCAG CGTGCCGGAA
CGAACGCGGC TGAACTTCCG CTTCGACCTG GGGGTTCGCG ACAAGCTTCG TGTCGGATAC
CTTTCAAACG ACTTCCACGA CCACGCGACC GCCCATCTCC TGATCGAGGC GCTCGAAGCC
ACTGACCGGA CGCGCTGCGA GCTGCACGCC TTCTCGTTCG GGGGCAATGA TCATGGCGCG
ATGCGCAGCC GGCTCAGCGG CGCGTTCGAG GTCTTTCACG ACATCACGGC GTCCACCGAC
AGTGACGCCG CCTCGGCGGT TCATGCGGCG GCCATCGACA TCCTGGTCGA CCTCAAGGGC
TTCACCCGGG GCGCGCGGAC CGGGATCATG ATGCTGCATC CGGCGCCGGT TCAGGTGAAC
TTCCTCGGCT ATCCCGGCAC GCTCGGCAGT GGCATCTGCG ACTACATCAT CACGGATCCG
TTCCTGACGC CGTTGGCAGC GGCCGCCGAT TACGCGGAGA GCTTTGCCTA TATGCCGCAT
TCCTATCAGC CGCATGGCCG GGCAGCGCTC GGCCGGCTGC CGAGCCGCGC CGAGGCGGGT
CTGCCGGAGA CAGGCTTCGT GTTCTGCTGC TTCAACCAGG CCTACAAGTT TACGCCTTCC
GTGTTCGACC TGTGGTGCCG CCTGCTCGCA GCGACCCCCG ACAGCGTGCT GTGGCTGCTG
GCCTCCGACC AGGCGCAGGG CAATCTGCGC GGCGAGGCGC TGCGCCGGGG CGTGTCGCCG
GATCGCCTGG TGTTCGCGCC GCAGATCGGC CAGAGCGAGC ATCTGCGGCG GCTGCAGCTC
GCCGACCTCG TGCTCGATAC CGCGCCGTAC GGGGCGCACA CCACGGCGAG CGACGCGCTC
TGGGCCGGCG TGCCGATCGT CACCTGCGCG GGCGACACGC TGGCCTCGCG GGTGGCCGGC
AGCCTGCTGC ATGCGGTCGG TCTTCCCGAG CTCATTGCGT CCGACGAGGC CGATTACGTC
GCGGTCGCGC TGACGCTTGC GGCTGAGCCG GACCTGCTGC TGGCGGCCAA GGCCCGGCTC
GCGCGCAACC GCCTGACGGC CCCGTTGTTC GATGCGGCCG CCTACGCCCG ATCGCTGCAC
GACCTCTACG AGCAGATGTG GAACCGGTGG CGGCGCGGCG CTGGACGAGA GCCGATCTGG
GCCGCGGCGG CGCCGCCAGG ATCACCGCGG CCCGGCTGA
|
|---|
| Protein sequence | MCAWDDFTQS ATAARRSLAQ ARSGQIPPFL MLSVPGMSAR EHRRCSELWV RDRVAASVPE
RTRLNFRFDL GVRDKLRVGY LSNDFHDHAT AHLLIEALEA TDRTRCELHA FSFGGNDHGA
MRSRLSGAFE VFHDITASTD SDAASAVHAA AIDILVDLKG FTRGARTGIM MLHPAPVQVN
FLGYPGTLGS GICDYIITDP FLTPLAAAAD YAESFAYMPH SYQPHGRAAL GRLPSRAEAG
LPETGFVFCC FNQAYKFTPS VFDLWCRLLA ATPDSVLWLL ASDQAQGNLR GEALRRGVSP
DRLVFAPQIG QSEHLRRLQL ADLVLDTAPY GAHTTASDAL WAGVPIVTCA GDTLASRVAG
SLLHAVGLPE LIASDEADYV AVALTLAAEP DLLLAAKARL ARNRLTAPLF DAAAYARSLH
DLYEQMWNRW RRGAGREPIW AAAAPPGSPR PG
|
|---|
| |