Gene BBta_7842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7842 
Symbol 
ID5151580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp8229743 
End bp8230291 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content70% 
IMG OID640562466 
ProductTetR family transcriptional regulator 
Protein accessionYP_001243573 
Protein GI148258988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.341573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.515425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACGC TCCATGAGCG CGCCGACGTC ATCCCGCTGA TCGCCGAGGT GTTTCGCGAG 
TTCGGCTTCG AGGGCACCTC GCTCAGCCGC ATCACCGAAA AGACGGCGCT GGGCAAGGGC
AGCCTGTATC ACTTCTTTCC CGGCGGGAAG GAGGAGATGG CGGGCGCCGT GCTCGCGCAT
GTCGACGCCT GGTTCGAGCG CGAGGTCTTC GCCCCGCTGC GCGACGATCC GCCCGATGTG
GCGATCGCTC GCATGTGGCG CGCCGTCGAT GATTATTTCC GCTCGGGGCG ACGTGTGTGC
CTGGTCGGCG CCTTTGCGCT CGACGAAACG CGAGACCGTT TCGCCGCGGT CATTGCCGGC
TATTTCACGC GCTGGATCGC GGCCCTGCGC GATGCGCTGG TGCGACGCGG CTGGGAGGCG
CGGGCGGCCA ATGACAGCGC CGAAGAGGCC GTGCTCGGCA TCCAGGGCGC GTTGGTGCTG
GCGCGCGCGA TGCGAGACGA CGCCGTGTTC GGCCGCGCGC TGGCGCGGCT ACGGGCGCGG
CTCGCATGA
 
Protein sequence
MRTLHERADV IPLIAEVFRE FGFEGTSLSR ITEKTALGKG SLYHFFPGGK EEMAGAVLAH 
VDAWFEREVF APLRDDPPDV AIARMWRAVD DYFRSGRRVC LVGAFALDET RDRFAAVIAG
YFTRWIAALR DALVRRGWEA RAANDSAEEA VLGIQGALVL ARAMRDDAVF GRALARLRAR
LA