Gene BBta_7823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7823 
Symbol 
ID5150706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp8206251 
End bp8207288 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content64% 
IMG OID640562447 
Productputative ABC transporter, permease protein 
Protein accessionYP_001243554 
Protein GI148258969 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGC GGGGCCTCAC CGGACTGTCG AGCTGGAACC GGCGCCTCGT CGCGGTCGGC 
GTGTTTGCAT GGTGCCTGAT CACGACGTTC CCGCTCTATT GGGTGGTGGT GACCGCCTTC
AAGACGCCGC CGGGAGTGGT CGGCGGCCCG ACCTACATCC CCTTCGTCGA TTTCACGCCG
ACCCTCGAGC CCTTCATCGA TCTCTACCAG GGGGTCCGGG GTGAGTTCTT CCGGACGTTC
CTGAACTCGA CGATCGTCGG CCTGTCCGCC GCGGCGATCG CCACCGCGAT CGGTGCGATG
GCGGCCTATG CTCTGGTGCG GTTCGAGTTC AAGGTTCGGT TCGGCGCAGG CCTGATCTTC
TTCCTGCTCG CACTCGGCGC CTATCTGCTG TTCAACAACA CTCTCGGATT CACCCGGCCG
CAGGCGCTGC TGCTGGCGTT TCCGATCGCG CTGGTCGCTG CCATCATCGC CAACCGGCTG
CCGTTGCCGG GCCCGATCCT CGGCAATGAG GACATCCTGT TCTGGTTTGT GAGCCAGCGC
ATGTTCCCGC CGATCGTCAC GGCCTTTGCG TTGTATCTGC TCTACAGCGA AATTGGCCGG
CTCGGCTTCC AGCTCGTCGA CAGCTATCTT GGCCTGACGC TGTGCTACGT CGCGTTCTCG
CTGCCGATCG TCGTCTGGCT GATGCGGGAC TTCTTCGAGG CGATCCCGAT CGAGGTGGAG
GAAGCCGCGA TGGTCGACAA CGTGCCGAGC TGGCGCATCT TCCTCGGCAT CGTGGTGCCG
ATGTCGATGA ACGGGCTGCT CGCGACCTTC ATGATCACGC TCGCCTTCGT CTGGAACGAG
TTCCTGTTCG CGCTGTTCCT GACCAATTCC AGATGGCAGA CGCTGCCGAT CCTGGTGGCG
GGACAGAACA GTCAGCGCGG TGACGAATGG TGGGCGATCT CCGCCGCGGC GCTCGTCGCC
ATCGTTCCGA TGATGATCAT GGCGGGCCTG CTCAGCCGCA TGATGCGGTC GGGCCTGCTG
CTCGGGGCAA TCAAATAG
 
Protein sequence
MSRRGLTGLS SWNRRLVAVG VFAWCLITTF PLYWVVVTAF KTPPGVVGGP TYIPFVDFTP 
TLEPFIDLYQ GVRGEFFRTF LNSTIVGLSA AAIATAIGAM AAYALVRFEF KVRFGAGLIF
FLLALGAYLL FNNTLGFTRP QALLLAFPIA LVAAIIANRL PLPGPILGNE DILFWFVSQR
MFPPIVTAFA LYLLYSEIGR LGFQLVDSYL GLTLCYVAFS LPIVVWLMRD FFEAIPIEVE
EAAMVDNVPS WRIFLGIVVP MSMNGLLATF MITLAFVWNE FLFALFLTNS RWQTLPILVA
GQNSQRGDEW WAISAAALVA IVPMMIMAGL LSRMMRSGLL LGAIK