| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7781 |
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| Symbol | |
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| ID | 5150745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 8167225 |
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| End bp | 8168178 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640562410 |
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| Product | putative DNA ligase-like protein |
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| Protein accession | YP_001243517 |
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| Protein GI | 148258932 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02778] DNA polymerase LigD, polymerase domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0711104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.114107 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGGCGCGA GCGAATTGCG ATTGCGTGTT GAAGGACACG AAATAGCGGT TACAAACCCG
GCCAAGTTGC TGTTTTCGGA CGATCATATC AGCAAGTACG AGCTCATTGA CTATTACCGG
TGGGTGGCAC CGCGGATGCT TCCGTTTCTG CGTGATCGGC CAATTGCCTT GGAGCGATAT
CCGAATGGCA TCGGACAAGT TGGGTTTTTT CAGAAGTCTG TGCCCTCCTA TTTTCCTGAC
TGGGTCAAAA CGATTGAAGT TGAAAAGAAA CAAGGAGGCG TAACCCGTCA TGTGATCTGC
AATAACGGGG CCGTGCTGGT GTATTTGGCA AATCAGGCAT GCATCACGCC ACATATATGG
ATCAGCCGGG TCGACAAGCT CGAATGCCCA GATCAAATGG TGTTTGACCT CGACCCTTCA
GCCGATGCGT TCGACTGGGT TAGGGCAGCG GCATTAGCTC TCAATGAACT CCTTCAAGAA
TTGACGCTGT CGGCCTATGT CAAATCGACC GGTTCGCGAG GATTGCATGT CATCGTGCCT
CTTAAGCGGA CTGAGTCATT CGAGTCAGTG CGCGCCTTCG CTCGCGCGGT CGCGATGCGT
GTTGTCATGG AGGAACCAAG TCAGCGAACT CTGCAGCAGC GCACTGGCTC GCGGCATGGA
CGCGTGTTCT TCGACATCAA CCGCAATGCT TACGCACAGA CCGTTGCGCC GCCGTATGCG
GTGAGAGCGC GGCCCAACGC TTCGTTGTCG ATTCCGCTCT TCTGGGAAGA GGTGCGCTCC
AAAACATTGC GGCCGGATGG CGTAACTCTT CGAGACATAC GCAAAAGGCT CGATGGAATG
ATTGATCCAT GGGCTGACTT TTGGCGCCGC GCAAGCGCAC TCGGGAGTGC ACGGCGTAAA
TTGGAGTTGC TCGGTGTCTC TGTCAGAGTA CCGCAAAAGG CGAAATTTCG CTAA
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| Protein sequence | MGASELRLRV EGHEIAVTNP AKLLFSDDHI SKYELIDYYR WVAPRMLPFL RDRPIALERY
PNGIGQVGFF QKSVPSYFPD WVKTIEVEKK QGGVTRHVIC NNGAVLVYLA NQACITPHIW
ISRVDKLECP DQMVFDLDPS ADAFDWVRAA ALALNELLQE LTLSAYVKST GSRGLHVIVP
LKRTESFESV RAFARAVAMR VVMEEPSQRT LQQRTGSRHG RVFFDINRNA YAQTVAPPYA
VRARPNASLS IPLFWEEVRS KTLRPDGVTL RDIRKRLDGM IDPWADFWRR ASALGSARRK
LELLGVSVRV PQKAKFR
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