| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7753 |
|---|
| Symbol | |
|---|
| ID | 5149243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 8143098 |
|---|
| End bp | 8143676 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640562393 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_001243500 |
|---|
| Protein GI | 148258915 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.496747 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0854702 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCCTG TCCGGAAGCG CAAGCTGGTT GACGCAGTCC GTAGCGACTG GGGTGTTTCG
ATCCGAAGAG CGTGTCGTGT GCTGCTGGTC GATACGTCCA TCTATCACTA CAAGTCGCGT
CGGCGCGGAC AGGCGCCCCT CGAACAACGG ATCAAGGAGA TTTGCCAGAC GCGCGTGCGC
TATGGCTATC GGCGTGTTCA CGTGCTGCTG CGACGAGGGG GTTGGTGTCA TGGTCAGAAC
AAAACCCGGC GCATCTACCG CGAGTTAGGC CTACAATTGC TCAACAAAAC GCCCAAGCGT
CGCGTGAAGG CCAAACTGCG GGACGACCGC CGACCGGCCA CACGATCGAA CGAGACCTGG
GCCATGGACT TCGTGCACGA CCAGCTGGCA ACCGGCCGCA AGCTGCGGGT ATCCCTGGCC
GGAATTCAGG GGAGCACGTC AAGTTGGAAA GTGACGCCAC TGAAGACGAG CTGGCGGCGG
AGCGCGCTGT GGCCAAGGCG ACGACGGTGC GCGGATTTAC GCGCCAGCGC GGCGAACGCC
AGACGTTCCC TGAGCATTTA CCGCGCGAAC GAGTGGTGA
|
|---|
| Protein sequence | MKPVRKRKLV DAVRSDWGVS IRRACRVLLV DTSIYHYKSR RRGQAPLEQR IKEICQTRVR
YGYRRVHVLL RRGGWCHGQN KTRRIYRELG LQLLNKTPKR RVKAKLRDDR RPATRSNETW
AMDFVHDQLA TGRKLRVSLA GIQGSTSSWK VTPLKTSWRR SALWPRRRRC ADLRASAANA
RRSLSIYRAN EW
|
|---|
| |