| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7749 |
|---|
| Symbol | |
|---|
| ID | 5149037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 8140425 |
|---|
| End bp | 8141321 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640562389 |
|---|
| Product | putative conjugal transfer protein trbG |
|---|
| Protein accession | YP_001243496 |
|---|
| Protein GI | 148258911 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
|---|
| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.359845 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0621057 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CTGAGCGCAT GCGCCACGCA GAGGCCGCCG CAGATCAGCT ATGACTCCGA TGTCCCGCCA
TTGCCGGCCG TTCCAGCGGC AATCGCGGAC GAGCGGCCGC GACCGCTGCA CATTCCGCCC
GCTTGGACTC CCAGCCATGG CGGGGCCGCC GCCAATTCGC CGACGGCGCG GGTGGCGAAC
GCCAATGCCG CCGCCCGCGT CGAGCCTCGC CGAGAGGGCT ACTACAACGC CATCCAGATT
TATCCATGGT CGGAAGGCGC GCTCTATCAG GTCTACACCT CGCCGGGACA GATCACGGAC
ATCGCGCTTG AGCCTGGCGA GAGCCTGACC GGCGCCGGCC CGATCGCCGC CGGCGACACC
GCGCGCTGGA TCATCGGCGA CACCGAAAGC GGATCGGGGA TCACGCGCCG TGTCCACGTG
CTAGTAAAGC CGACGCGGCC CGACATCACC ACCAACCTTG TCATCACCAC CGATCGCCGC
AGCTACATGA TCGAGCTGCG GGCCGGCGCC AATCCGTACA TGCCGGCCGT GGCATGGGCC
TATCCACAAC TTCCCGCTTC GCAGCGTGCG GGTGTCCCGG CGACGCCGGT CATCCCCGCC
GCCGCGGCGC GCAACTATCG CTACGCTTTG AGCGGCGACA ATCCGCCTTG GCGACCAATC
GCCATCTATG ACGATGGACG GCGGGTTTAT GTCGAGTTCC CGCGCGGCAT CGTTCAGGGC
GAGATGCCGC CGCTCTTCGT CATCGGCTCG GAAGGCGAGC TCCAGATCGC CAACAGCCGC
ATCTACCAGA ACGTCCTAAT CGTCGATCGC CTCTTCGGCG CCGCCGAGCT TCGCCTTGGC
AGCGGTGACC GCCAGCAAAA GATCAGGATC TCGCGCAGCG ACGGGAGGCC ATCGTAA
|
|---|
| Protein sequence | MSACATQRPP QISYDSDVPP LPAVPAAIAD ERPRPLHIPP AWTPSHGGAA ANSPTARVAN
ANAAARVEPR REGYYNAIQI YPWSEGALYQ VYTSPGQITD IALEPGESLT GAGPIAAGDT
ARWIIGDTES GSGITRRVHV LVKPTRPDIT TNLVITTDRR SYMIELRAGA NPYMPAVAWA
YPQLPASQRA GVPATPVIPA AAARNYRYAL SGDNPPWRPI AIYDDGRRVY VEFPRGIVQG
EMPPLFVIGS EGELQIANSR IYQNVLIVDR LFGAAELRLG SGDRQQKIRI SRSDGRPS
|
|---|
| |