| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7741 |
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| Symbol | trbB |
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| ID | 5149753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 8133137 |
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| End bp | 8134120 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640562381 |
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| Product | conjugal transfer protein trbB |
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| Protein accession | YP_001243488 |
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| Protein GI | 148258903 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.685768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTTT CATTCCAGCA ATCCGAGGCG GTCCTTCGCG GCACGCGTAT GCTGCGCACG
GCGCTTGGCC CGGCCATTGC AGGCTTCCTG GAAGACCCGT CGATCGTCGA GGTGATGCTC
AACCCGGACG GGCGGCTCTG GATCGACCGG CTTTCCGGGG GTTTGGCCGA TACGGGTGAG
CGACTGTCGC CTGCCGACGG CGAGCGCATT GTCAGGCTCG TCGCCCACCA TGTCGGCGCC
GAGGTCCACG CCGGCAGCCC GCGTGTCTCG GCCGAACTGC CCGGAACGGG AGAGCGCTTC
GAGGGCCTCC TGCCGCCTGT CGTGGCCGCG CCGGCGTTTG CGATCCGCAA GCCCGCGGTC
GCCGTGTTCA CGCTGCACGA CTATGTCGCC GCCGGCATCA TGTCGGCCGA GCAGGCGGAG
ATTCTCCGCC GCGCCGTCGC CGACCGCCGC AATATCCTGG TCGCCGGCGG AACGAGCACC
GGCAAGACCA CGCTCACCAA CGCACTGCTC GCGGAAGTCT CGAAGTCGGC CGATCGCGTC
GTCCTGATCG AGGACACGCG CGAGCTTCAA TGCGCGGCGC CCAATCTCGT CGCCATGCGC
ACCAAGGACG GCGTCGCCAC GCTCTCCGAC CTCGTGCGCT CTTCGCTGCG CCTGCGCCCC
GACCGCATTC CCATCGGCGA GGTGCGCGGC GCCGAGGCGC TCGACCTCCT GAAGGCGTGG
GGCACCGGAC ATCCCGGCGC CATCGGCACC ATCCACGCCG GCACCGCGAT CGGCGCGCTT
CGCCGCCTCG AGCAGCTCAT CCAGGAAGCC GTCGTCACGG TCCCGCGCGC GCTGATCGCA
GAAACCATCG ATCTCGTCGC CGTGCTGAGC GGCCGCGGCG CCTCGCGCCG TCTCGCCGAG
CTCGCCCGCG TCGAGGGCCT CGGACCCGGC GGCGACTACC GCATCACCCC CGCGACAGCA
GGCCCAGCAG GAGATCACGC ATGA
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| Protein sequence | MAVSFQQSEA VLRGTRMLRT ALGPAIAGFL EDPSIVEVML NPDGRLWIDR LSGGLADTGE
RLSPADGERI VRLVAHHVGA EVHAGSPRVS AELPGTGERF EGLLPPVVAA PAFAIRKPAV
AVFTLHDYVA AGIMSAEQAE ILRRAVADRR NILVAGGTST GKTTLTNALL AEVSKSADRV
VLIEDTRELQ CAAPNLVAMR TKDGVATLSD LVRSSLRLRP DRIPIGEVRG AEALDLLKAW
GTGHPGAIGT IHAGTAIGAL RRLEQLIQEA VVTVPRALIA ETIDLVAVLS GRGASRRLAE
LARVEGLGPG GDYRITPATA GPAGDHA
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