Gene BBta_7682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7682 
Symbol 
ID5155602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp8080031 
End bp8081224 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content63% 
IMG OID640562323 
Productputative branched-chain amino-acid ABC transporter, periplasmic binding protein 
Protein accessionYP_001243431 
Protein GI148258846 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.540186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAACGT CACATATTTT CAAAGGTATT GCTTTATCAT TGGCTGCAGC CGTGCTGGCC 
ACCGCCGCAC AGGCCGACGA TCTGAAAATC GCTCTCATCT ATGGCAAGAC CGGGCCGCTC
GAGGCCTACG CCAAGCAGAC CGAAACCGGC CTGCGTCTCG GCTTCGAATA CGCCACCAAA
GGCACCAACA TGATCGACGG TCGCAAGATC GTCATCATCA CCAAGGACGA TCAGGGCAAG
CCCGACCTGT CGAAAGCCGC GCTTTCAGAG GCCTATCAGG ATGACGGCGC CGACATCGCC
ATCGGCACCA CGTCTTCGGC CGCGGCGCTC GCCGACCTGC CGGTCGCCGA GGAGAACAAG
AAGATCCTGA TCGTCGAGCC GGCCGTGGCG GACCAGATCA CTGGCGAGAA GTGGAACCGC
TACATCTTCC GCACCGGCCG CAACTCGTCG CAGGACGCGA TCTCCAACGC GGTGGCGATC
GGCAAGCCCG GCGTCACCGT CGCCACGCTG GCGCAGGATT ACGCGTTCGG CCGCGACGGC
GTCGCCGCCT TCAAGGAGGC GCTGGCCAAG ACCGGCGCGA CCCTGGCAGC CGAGGAATAC
GTCCCGACCA ACACCACCGA CTTCACTGCC GTCGCGCAGC GCTTGTTCGA CGTGCTGAAG
GACAAGCCGG GGCGGAAGTT CATCTGGGTG CTCTGGGCCG GCGGCGGCAA CCCGCCAGGC
AAGCTGCAGG ACATGGACCC GAAGCGCTAC GGCATCGAGA TTTCCACCGG AGGCAATATC
CTCGCCGCGC TCGCCGCCTA TAAGCAGCTG CCGGGCATGG AAGGCGCCAC CTATTACTAC
TATGACATTC CCAAGAATCC GGTGAACGAC TGGCTGCTCG CCGAACACCA GAAGCGCTTC
AGCTCGCCCC CCGACCTGTT CACGGCCGGC GGCTTCTCAG CCGCGATGGC GGTTGTCGCC
GCGGTCACCA AGGCGAAGTC GACCGATACC GAGAAGCTGA TCGCGGCGAT GGAGGGCATG
GAGTTCGACA CGCCCAAGGG CAAGATGATC TTCCGGAAGG AAGATCACCA GGCGCTGCAA
AGCATGTATC ACTTCCGTGT CAAGGTCGAT CCGAACCTCG CCTGGGCCGT GAACGAACCG
GTACGCGAGA TCAAGATCGA GGACATGGAT ATCCCGATCC GCAACAAGCG CTGA
 
Protein sequence
MGTSHIFKGI ALSLAAAVLA TAAQADDLKI ALIYGKTGPL EAYAKQTETG LRLGFEYATK 
GTNMIDGRKI VIITKDDQGK PDLSKAALSE AYQDDGADIA IGTTSSAAAL ADLPVAEENK
KILIVEPAVA DQITGEKWNR YIFRTGRNSS QDAISNAVAI GKPGVTVATL AQDYAFGRDG
VAAFKEALAK TGATLAAEEY VPTNTTDFTA VAQRLFDVLK DKPGRKFIWV LWAGGGNPPG
KLQDMDPKRY GIEISTGGNI LAALAAYKQL PGMEGATYYY YDIPKNPVND WLLAEHQKRF
SSPPDLFTAG GFSAAMAVVA AVTKAKSTDT EKLIAAMEGM EFDTPKGKMI FRKEDHQALQ
SMYHFRVKVD PNLAWAVNEP VREIKIEDMD IPIRNKR