| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7654 |
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| Symbol | |
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| ID | 5155627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 8053203 |
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| End bp | 8055881 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640562297 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001243405 |
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| Protein GI | 148258820 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.577778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCAA GCGAGTTCCC ACCGGCCGCA TCTGCGAACC TGCTTTCGGC CGCGCTCGAT
CGTGTCTCCG AGGCGATTCT CTTTCTCGAC GCAGAGGGCC GTGTCCATCA CGCCAACCAG
GCGGCGGTTG CCTTGTTGCG ACGCGACCTC AAGGACCTGA TCGGCGCCGA TCTCGATCGT
CTCGGCCTGC CGGCCGAGCA GCTTCGCGCA ATGACCAAGA GCGAAGCCGA GGCGCCCGCA
GATGCGCCAC ACGCGGCCGA GGCGGGCGAT GCCGGCCGTG AGATGATGCT CCGCCACGCG
GATGGCTCCC GCTGCCGGGT GCGCGCTATC GTTCGCGATC TCCCGTCCGA CCACGCGCCG
ATGCATTCGC TGCTGCTGCT GCGCGACGTG ACGTCCGATG TCGAGATGCG CGAGCGCAAC
GCACTGCTGA CCTCGGTCGC CGACCGCAGC AACCGCGCCG TCATCGTCAC CGACCACGAG
TTGAAGATCC TCTATACCAA CGCGGCCTTC TGCAGCATCT TCGGCTACAG CAGCGCGGAG
GTGCTCGGGC GGCAAGTGGA GACACTTCTG GTCGGGCCCT GTACCGATCC CGCGACGGTC
GAACGCCTGA AGCAATGCGT GGAGGATGAT CGGGGCGTCG AGGACGACCT GATGATCTAC
GACAAAGCGG GCTGCGAGAT CTGGACCACG GCCCACGTCA AGGCGCATCG CAACCAGCGC
GGCAAGGTCA AATATCTGGT CGGGCTGCTC AGCGATATCC GCGAGACCAA GCAGCTGCGC
TCCCTGCAGC AGCTGATCAT GTCGTCCTTG GCCTCCGACA TCGCGATCGC GACCATTGCC
GACCAGCTCT GCCGCCGGGT CGAGGAACTC GCCCCCGACG TCGTCTGCTC GATCCTCCAT
GTCGACTCGG GAGGACGGAT TCATCCGCTC GGCGGCCCAA GCCTGCCGGC GGACTACTCG
TCCGGCCTGG ACGGCGTTGC GATCGGTCCC GACGTCGGTT CCTGTGGCAC GGCCGCCTAT
CTGTGCGAGC CGGTGCTGGC CCGCGACATC GACAGCGATC CGCGTTGGCA ACCCTATAAG
GCTGGTCCGC TCGGAGCGGG GCTGCGCGCC TGCTGGTCGA CGCCTATCCA GGGCAAGGAT
GGCCGGGTGA TCGGCACCTT CGCCTTCTAT TTCCGCGAAT GCCGAGGCCC GAGCCCCTGG
CACGAGCAGA TCGTCGCCGC CTGCGTCCAG CTCGGCGCGC TCGCCATCGA GCGGCAGGAG
GTGAGGTCGA CGATCTCGCA GGTCGCCTAT CACGACATGC TGACGGGCCT GCCCAATCGC
GCCCGCATCC CCTCGATGAT CGCCGAGGCT ATCAATGCCT GTCCCGAGGG CAGCCATCTC
GCGATTGCCT TCCTCGACGC CGACAATTTC AAGGACGTCA ACGACACGCT GGGTCATGCC
GCCGGCGACG AGTTCCTGGT TGCCTTCGCC AACCGACTCC GCGCCCAGAT CCGTCCCGGT
GACATGCTGG GCCGGCTTGG CGGCGACGAG TTCGTGATCG TGCTGCAGAA CCGCGATGCC
CTCGAGGCGT CGCTGGCGGC GGCGCGGATC ACCGCCGCGC TGGCGATGCC GCTGACGATC
GGCAAGCGCC AGGTGCCGAT GTCGGCGAGC ATGGGGCTCA GCCTGTATCC GGACAACGCC
ACCGACATCG AGACCCTGAT CAAGCAGGCC GATGGGGCGA TGTACAAGGC CAAGCGCGCC
GGGCGCGCCA CCTATCGCTT CTTCAGCGCC GACATCGACA AGCTCGCCGA GGAACGGCTG
ATGCACTCGA CCGCGCTGCG CGAGGCGATC GCGAGCGAGG CCCTGACGCT GAATTATCAG
CCGCAGATCT GCACCCGCAA TGGCGCGATC CATGGCGTCG AGGCGCTGGC GCGCTGGCAT
GATCCGGTGC TGGGCGAGGT CTCACCTTCC AAGTTCATTC CGCTCGCCGA GGAATGCGGT
CTGATCGAGC AGATCGGTGT GTGGTCGATC AAGCAAGCCT GCCAGCAGAT GGCGTCGTGG
CGGCGCGCCG GTCTCGACAT CCCCTGCATC TCGGTGAACC TGTCGCCGAT CAACTTCCAG
AACGTCAATC TGGCGGCCGT GGTGGCTCAG ATCCTGGCTG CCAACGACCT GCCGGCGAAG
ATGCTGATGC TCGAGATCAC CGAGGGCGTG ATTCTCAATG AGCGCGCCAC CGTGATCGCC
ACCATGAGCG AGCTGCGCAA CATGGGGGTG GGCCTGTCGC TGGACGATTT CGGTACCGGC
TATTCCAGCC TCAGCCGTCT GGCGCAGCTG CCGATCCACG AACTCAAGAT CGACCGCAGC
TTCATGCGCG ATTTCGAGAA CGACCAGGGC ACGCGGGCGA TCGTGACCGC CGTGGTCAGG
GTCGGCCAGA GCCTGGACGT CAAGGTCGTC GCCGAGGGCG TCGAAACCGA GCCGCAGCGG
CGGCTGCTGG CCGAGCTTGG CTGCGATGCG ATGCAGGGCT TCCTGTTCGC GCGGCCGATG
GCCGCTGGAG CGTTCAGCCG CTGGCTGCTG GACTACAGCG CGCATCGCGC CAGCCTCATG
CTGCGGCAGG TCGGCCGCGC ACTGGCGCAG GCGGCCGGCG TCAGCGAGGT CAGCGAGGGC
GAGCGCTTAT CGCCTGCTGC GATCGCCGCA GCCAGTTGA
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| Protein sequence | MLASEFPPAA SANLLSAALD RVSEAILFLD AEGRVHHANQ AAVALLRRDL KDLIGADLDR
LGLPAEQLRA MTKSEAEAPA DAPHAAEAGD AGREMMLRHA DGSRCRVRAI VRDLPSDHAP
MHSLLLLRDV TSDVEMRERN ALLTSVADRS NRAVIVTDHE LKILYTNAAF CSIFGYSSAE
VLGRQVETLL VGPCTDPATV ERLKQCVEDD RGVEDDLMIY DKAGCEIWTT AHVKAHRNQR
GKVKYLVGLL SDIRETKQLR SLQQLIMSSL ASDIAIATIA DQLCRRVEEL APDVVCSILH
VDSGGRIHPL GGPSLPADYS SGLDGVAIGP DVGSCGTAAY LCEPVLARDI DSDPRWQPYK
AGPLGAGLRA CWSTPIQGKD GRVIGTFAFY FRECRGPSPW HEQIVAACVQ LGALAIERQE
VRSTISQVAY HDMLTGLPNR ARIPSMIAEA INACPEGSHL AIAFLDADNF KDVNDTLGHA
AGDEFLVAFA NRLRAQIRPG DMLGRLGGDE FVIVLQNRDA LEASLAAARI TAALAMPLTI
GKRQVPMSAS MGLSLYPDNA TDIETLIKQA DGAMYKAKRA GRATYRFFSA DIDKLAEERL
MHSTALREAI ASEALTLNYQ PQICTRNGAI HGVEALARWH DPVLGEVSPS KFIPLAEECG
LIEQIGVWSI KQACQQMASW RRAGLDIPCI SVNLSPINFQ NVNLAAVVAQ ILAANDLPAK
MLMLEITEGV ILNERATVIA TMSELRNMGV GLSLDDFGTG YSSLSRLAQL PIHELKIDRS
FMRDFENDQG TRAIVTAVVR VGQSLDVKVV AEGVETEPQR RLLAELGCDA MQGFLFARPM
AAGAFSRWLL DYSAHRASLM LRQVGRALAQ AAGVSEVSEG ERLSPAAIAA AS
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