| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7642 |
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| Symbol | mutS |
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| ID | 5150854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 8036256 |
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| End bp | 8038988 |
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| Gene Length | 2733 bp |
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| Protein Length | 910 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640562285 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001243393 |
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| Protein GI | 148258808 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.532158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCC AGCAGCCCAT CACCGCCCCG GTTCCACAGG AAACCGCGCC CGCCGAGGCG
CCGGCCAAGC TCACGCCGAT GATGGAGCAA TATCTGGACA TCAAGGCCGC CCATCCGGGG
CTGATGCTGT TCTACCGGAT GGGCGACTTC TACGAGCTGT TTTTCGAGGA CGCGGAGGTC
GCGTCGAAGG CGCTCGGCAT CGTGCTGACC AAGCGCGGCA AGCATCAGGG CCAGGACATC
CCGATGTGCG GCGTGCCGGT GGAGCGCTCC GAGGACTATC TGCACCGGCT GATCGCGCAA
GGCATCCGTG TCGCCGTCTG CGAGCAGATG GAGGATCCGG CGGCGGCGCG CGCGCGCGGC
AACAAGAGCG TGGTCAAGCG CGGCGTGGTG CGCGTGGTGA CGCCGGGCAC GCTCACCGAA
GACAATCTGC TCGATGCCCG CGCCAATAAT TATCTGCTGG CGATCGCGCG CAGCCGCGGC
TCCTCCGGCG GCGACCGGCT CGGGCTCGCC TGGATCGACA TTTCGACCTC GGACTTCATC
GTCACCGAAT GCGCCTTCGC CGAGCTGACC GCGACGCTCG CCCGCATCAA TCCGAACGAA
GTGATCATCT CGGATGCGCT GTATTCGGAT GAAGTCTTCG AGCCGGTGCT GCGCGAGCTC
GCCGCGGTGA CGCCGCTGAC GCGCGACGTA TTCGACGGCG CCACCGCCGA GCGCCGGCTG
TGCGATTATT TCGCGGTGGC CACGATGGAC GGCCTCGCCG TGCTGTCGCG GCTGGAAACC
ACCGCTGCCG CCGCCTGCGT CACTTATGTC GAGCGGACAC AAGTGGGGCA GCGCCCGCCG
CTGGCGCCGC CGGCGCGCGA GGCGACCGGC AGCACCATGG CGATCGACCC GGCCACCCGG
GCCAATCTCG AGCTGACGCG CACGCTCGCC GGCGAGCGCC GCGGCTCGCT GCTCGACGCC
ATCGACTGCA CGGTGACCTC GGCCGGCTCA CGCCTGCTGG CGCAGCGGCT TGCGGCGCCC
TTGACGGAGC CGGCGCAGAT CGGCCGCCGG CTCGATGCCG TCAACGTGTT CGTCGCCGAC
AGCGCCGCGC GCGAGGACAT CCGCGCGATC CTGCGCGGCG CGCCGGACAT GACGCGCGCG
ATGGCACGGC TGTCGGTCGG CCGCGGCGGC CCGCGCGATC TCGCGGCCTT ACGCGACGGC
ATCCTCGCCG CCGACCAGGC GCTCGGGCGG CTGTCGGCGC TGGATCAGCC GCCGCAGGAG
ATCGCGGCCG CGATGGCGGC GCTGGCGCGG CCGGCGCGCG CGCTCGCCGA AGAATTGAGC
CGCGCGCTCG ACGAGCAGTT GCCGCTGATC AAGCGTGACG GCGGCTTTGT CCGCTCAGGC
TATGATTCGA CCCTCGACGA GACGCGCAAT CTGCGCGACG CGTCCCGCCT CGTCGTCGCC
TCGATGCAAG CGCGCTATGC CGACCAGACC GGCGTCAAGG CGCTCAAGAT CCGCCACAAC
AACGTGCTCG GCTATTTCGT CGAGGTCACC GCGCAGCACG GCGATAAATT GATGTCGGCG
CCGCTGAACG CGACCTTCAT CCATCGCCAG ACGCTCGCCG GACAGGTGCG CTTCACGACA
TCGGAGCTCG GCGAGATCGA GGCCAAGATC GCGAACGCCG GCGAACGCGC GCTCAATCTC
GAGCTCGAGA TCTTCGACCG GCTGTGCGGA CAAGCGCTGG CGATCGGCGA CGATCTGCGC
GCTGCGGCCC ATGGCTTTGC GATGCTCGAT GTCGCGACTG CGCTGGCCAA GCTCGCGGTC
GATGACAACT ACATCAGGCC GGAGGTCGAC GGCTCGCTCG GCTTCGCCAT CGAGGGCGGC
CGCCATCCGG TGGTCGAGCA GGCCTTGAAG CGCGAAGGCC AGCCCTTCAT CGCCAATTCC
TGCGATCTGT CGCCGACGCC GGGGCACAAA AGCGGCCAGT TGTGGCTGCT CACCGGCCCG
AACATGGCGG GTAAATCGAC CTTCCTGCGC CAGAACGCCT TGATCGCCCT GCTCGCGCAG
ATCGGCTCGT TCGTTCCGGC GACGCGGGCC CGCATCGGCA TCGTCGACCG GCTGTTCTCG
CGCGTCGGCG CCGCCGACGA TCTGGCGCGC GGACGCTCGA CCTTCATGGT CGAGATGGTC
GAGACGGCGG CGATCCTCAA CCAGGCCGGC GAGCGCGCGC TGGTGATCCT GGACGAGATC
GGCAGGGGCA CCGCGACCTT CGACGGCCTG TCGATCGCCT GGGCCGCGAT CGAGCATCTG
CACGAGAGCA ACCGCTGCCG CACGCTGTTC GCCACGCATT ATCACGAGCT GACGGCGCTC
GCCGCCAAGC TGCCGCGGCT GTTCAACGCC ACGGTGCGGG TCAAGGAATG GCACGGCGAC
GTGGTGTTCC TGCACGAGGT GCTGCCCGGC TCCGCCGACC GCTCCTATGG AATTCAGGTG
GCGAAGCTCG CCGGCCTGCC GCCGGCCGTG ATCAGCCGCG CCAAATCGGT GTTGGCGAAG
CTGGAGGCCG CCGACCGCGG CCAGAACGCG CGGGCGCTGG TCGACGATCT TCCGCTGTTC
GCCGTGCCGT CGCGCGCGGC GCCCGAGCCC GCGATGTCGA AAGAAGCGGA GGAGCTGATT
GCCGCGGTCA AGGCGCTGCA CCCCGACGAG ATGACGCCGC GCGAAGCGAT GGACGCGCTG
TATGCGCTGA AGGCGAAGCT GCCGAAGGGC TAA
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| Protein sequence | MTIQQPITAP VPQETAPAEA PAKLTPMMEQ YLDIKAAHPG LMLFYRMGDF YELFFEDAEV
ASKALGIVLT KRGKHQGQDI PMCGVPVERS EDYLHRLIAQ GIRVAVCEQM EDPAAARARG
NKSVVKRGVV RVVTPGTLTE DNLLDARANN YLLAIARSRG SSGGDRLGLA WIDISTSDFI
VTECAFAELT ATLARINPNE VIISDALYSD EVFEPVLREL AAVTPLTRDV FDGATAERRL
CDYFAVATMD GLAVLSRLET TAAAACVTYV ERTQVGQRPP LAPPAREATG STMAIDPATR
ANLELTRTLA GERRGSLLDA IDCTVTSAGS RLLAQRLAAP LTEPAQIGRR LDAVNVFVAD
SAAREDIRAI LRGAPDMTRA MARLSVGRGG PRDLAALRDG ILAADQALGR LSALDQPPQE
IAAAMAALAR PARALAEELS RALDEQLPLI KRDGGFVRSG YDSTLDETRN LRDASRLVVA
SMQARYADQT GVKALKIRHN NVLGYFVEVT AQHGDKLMSA PLNATFIHRQ TLAGQVRFTT
SELGEIEAKI ANAGERALNL ELEIFDRLCG QALAIGDDLR AAAHGFAMLD VATALAKLAV
DDNYIRPEVD GSLGFAIEGG RHPVVEQALK REGQPFIANS CDLSPTPGHK SGQLWLLTGP
NMAGKSTFLR QNALIALLAQ IGSFVPATRA RIGIVDRLFS RVGAADDLAR GRSTFMVEMV
ETAAILNQAG ERALVILDEI GRGTATFDGL SIAWAAIEHL HESNRCRTLF ATHYHELTAL
AAKLPRLFNA TVRVKEWHGD VVFLHEVLPG SADRSYGIQV AKLAGLPPAV ISRAKSVLAK
LEAADRGQNA RALVDDLPLF AVPSRAAPEP AMSKEAEELI AAVKALHPDE MTPREAMDAL
YALKAKLPKG
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