| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7635 |
|---|
| Symbol | |
|---|
| ID | 5151404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 8029439 |
|---|
| End bp | 8029930 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640562279 |
|---|
| Product | ferric uptake regulator family protein |
|---|
| Protein accession | YP_001243387 |
|---|
| Protein GI | 148258802 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.585134 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCG CAAAACCCAC CTTCCCGGCG CCGGACCATG ATCATGGCCG CTGTGCGGCC
GATGCTCTGA CCCACGCCGA GCGCGTCTGC GCCCAGCGCG GCCAGAAGTT CACGCCCTTG
CGGCGCCAGG TGTTGGAGGC GTTGCTCTCC AGCCATCGGC CGCTCGGCGC CTATGAGATC
ATCGAGGAAC TCGCGAAGGT GGCGCCGCGG CCGGCCCCGA TCACGGTGTA TCGCGCGCTC
GAGTTCCTGA TGGCCAACGG CCTGGTGCAC CGCATCGAAA GCCGCAACGC CTTTCTCGCC
TGCGCGCATG ACCATGAGCA GACCGCGCTG GTGGCGTTCC TTATCTGCGA GAGCTGCGGT
GCCGTCGGCG AGGTTCCCGC CGCGCCGATT GCGGAAAGTT TGAAGAGCGC GGCGGCGGCG
TCGGGGTTCC TGCCCAAGAT GTCGGTGGTC GAGATCACCG GCCTCTGCGC ACATTGCCAG
AAGGCGGCGT GA
|
|---|
| Protein sequence | MTLAKPTFPA PDHDHGRCAA DALTHAERVC AQRGQKFTPL RRQVLEALLS SHRPLGAYEI
IEELAKVAPR PAPITVYRAL EFLMANGLVH RIESRNAFLA CAHDHEQTAL VAFLICESCG
AVGEVPAAPI AESLKSAAAA SGFLPKMSVV EITGLCAHCQ KAA
|
|---|
| |