Gene BBta_7625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7625 
Symbol 
ID5149278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp8017418 
End bp8019025 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content66% 
IMG OID640562269 
Productputative sodium/hydrogen antiporter (exchanger) 
Protein accessionYP_001243377 
Protein GI148258792 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR00831] Na+/H+ antiporter, bacterial form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.356238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.95176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTC ACTTTCAGAT ATTCCTGGTC CTGCTGGCGG TGCTGGCGGG AACCGCATTG 
ATCGCGCGGC GCGCCAATCT CGCGCCGGCG ATCCTCATGA TGCTGGCCGG CATCGCGCTG
GCCTTCGTGC CGACCATGCC GGCCTTCGCA CTGCCGCCAG AGCTGGTGCT GCTCGTCGTG
CTGCCGCCGC TGATCTATTC CTCCAGCGTC GCGATGAGCT GGCGCGAGTT CAAGCGCAAT
CTGCGGCCGA TCGTGCTGCT GGCGGTCGGT TGCGTGCTCT TCACCGCCTC CGCGGTGGCG
ATCGCGACCC ACTATCTTCT CGGCCTCCCC TGGAGCATCG GCTTCCTGCT CGGCGCCATC
GTCGCACCGC CTGATGTCGT GGCGCCGCTC GCCATCGCCC GCCGGCTGCA TCTGCCGCGC
CGGGTCATGG TGATCCTCGA AGGCGAGGGC CTCGCCAACG ACGCGACCGC GCTGATCCTC
TATCGCTTCG CGGTGGCCGC GATCACCACC GGCACCTTCT CGCTCCCGGT TGCCGCCGGC
GAGTTTGCCG CGATCGTGGT CGGCGAGATC GCCTTCGGCA TCGGCGTCGG CTGGCTGATG
CTGCGCGCCC GCCACTATGC GCGCGACCCG CAGGTCGAGA TCACATTGTC CGTGCTGACG
CCCTATCTGG CGTTCTGGAT CCCCGAGCAT GTCGGGGGCT CCGGCGTAAT CGCAACGGTC
GCCTGCGGCC TCTATATGAG CTGGAACGGG CCGCTGTGGA TCTCCTCGGC AACCCGCCTG
CAGGGCGTCT TCTTCTGGGA CCTCATGATC TACCTGATCG AGGGCATGCT GTTCCTGCTC
ACCGGCTTCC AGATGCGGCT GATCTACGAG AAGTCGAAGA TCTTTTCGCT CGACGAGATC
GTGATCGCGA CCGCTCTGGT GCTCGCCATC GTCGTGATCG CGCGCTTCGC CTGGACGTTT
CCGGCGACCA TCCTGCCGCG CCTCTTGAGC AGTTCGCTCC GCGCCCGCGA TCCGCTGCCG
CCTTGGCAGC AGACCTTCAT CATCGGCTTC ACCGGCGTGC GCGGCACGGT TTCGCTGGCG
ACCGCCCTGG CGCTGCCGCT GACATTGTCG ACCGGCGATG CCTTCCCCTA TCGTGACCAG
ATCCTGTTCA TCGCCTTCGG CGTCATCTTC TTCACCCTGA TCGGGCTCGG CCTTACACTG
CCGACGGTCG TGCAATGGCT CGGCGTCGCC CGCACGGGAC GCGCCGAGCA TGCCCGCGAG
CACGAGCAGG AAATCGCCGC CCGGCGCGAG GCGCTCGACA GCGCACTGCG GTCGCTGGAG
ACGATGACCA ATGATCGCGA CCTGTCGGAT GAGGTGGTTC GGCTGCTGCG GGCACGCCAC
GAGGTGCGGG CCAACCAGCT GCCCGAGGGT CTCAAGCCGG ATGACAACGA CGCGTCCGCG
CTCGGCATCG AACTGACGCG CGAATTGATC ACGGCGGAAC GCAAGTTCAT CCATGTGATG
CTGCGCGACG GCAAGATCAC CGACGAGACC CGCCGCCGCA TCGAGCGCGA CCTCGATCTG
GAAGAGGCAA GCCTCGCCAA TCGGGAATAC GAGCACCTGC CGCTGTAA
 
Protein sequence
MEAHFQIFLV LLAVLAGTAL IARRANLAPA ILMMLAGIAL AFVPTMPAFA LPPELVLLVV 
LPPLIYSSSV AMSWREFKRN LRPIVLLAVG CVLFTASAVA IATHYLLGLP WSIGFLLGAI
VAPPDVVAPL AIARRLHLPR RVMVILEGEG LANDATALIL YRFAVAAITT GTFSLPVAAG
EFAAIVVGEI AFGIGVGWLM LRARHYARDP QVEITLSVLT PYLAFWIPEH VGGSGVIATV
ACGLYMSWNG PLWISSATRL QGVFFWDLMI YLIEGMLFLL TGFQMRLIYE KSKIFSLDEI
VIATALVLAI VVIARFAWTF PATILPRLLS SSLRARDPLP PWQQTFIIGF TGVRGTVSLA
TALALPLTLS TGDAFPYRDQ ILFIAFGVIF FTLIGLGLTL PTVVQWLGVA RTGRAEHARE
HEQEIAARRE ALDSALRSLE TMTNDRDLSD EVVRLLRARH EVRANQLPEG LKPDDNDASA
LGIELTRELI TAERKFIHVM LRDGKITDET RRRIERDLDL EEASLANREY EHLPL