Gene BBta_7620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7620 
SymbolmtgA 
ID5152512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp8012410 
End bp8013081 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content67% 
IMG OID640562264 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_001243372 
Protein GI148258787 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0174278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.567558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGTACCG TCAGAACCAT CCTGCTGATC GTCGTGCTGG TGCTGCTCGT GCCCTATGTG 
CTGACGCCGT TCTATGCTGC CGGTCACCCG GTTTCGACCC TGATGCTCTG GCGGTCCCTG
ACCGGCCAGC CGGTGACGCG GCATTGGATC GACCTTTCGG CGATGTCGCC TTATCTGCCG
CGGTCCGTTG TGGCGGCCGA GGATGCCAAA TTCTGCAGCC ATCACGGCAT CGATTGGGGC
GCGCTGCGCG AGGTGATGGA CGATGCCGAG GAGGGCGACG TCAGCCGTGG CGGCTCGACC
ATCACTCAGC AGGTCGCCAA GAACCTGTTC CTGTGGCAGG GCCGCAGCTA TGTCCGCAAG
GCGCTGGAAC TGCCGCTGGC GCTCTGGATC GACCTCGTCC TCGGCAAGCG GCGCATCCTG
GAGATCTACC TCAACATCGC CGAGCTCGGT CCATCCGGCC AATTCGGGGT CGAAGCCGGG
GCAAATTACG CCTTCAACCG CTCAGCCGCC GGGCTGGGGC CGCGCGAGGC GGCGCTGCTG
GCCGCGATCC TGCCGAATCC GGTCCGGCGC TCCGCCCGAA CCCCTGGTCC TGGCGTGCGC
CGTTTGTCGG GGACCTATAT GGTGCGGGGC CAGGCCTCGG CCCTGCAGAC CTGCTGGGGC
GAGCGGCACT GA
 
Protein sequence
MRTVRTILLI VVLVLLVPYV LTPFYAAGHP VSTLMLWRSL TGQPVTRHWI DLSAMSPYLP 
RSVVAAEDAK FCSHHGIDWG ALREVMDDAE EGDVSRGGST ITQQVAKNLF LWQGRSYVRK
ALELPLALWI DLVLGKRRIL EIYLNIAELG PSGQFGVEAG ANYAFNRSAA GLGPREAALL
AAILPNPVRR SARTPGPGVR RLSGTYMVRG QASALQTCWG ERH