Gene BBta_7613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7613 
SymbolphbB 
ID5154548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp8005634 
End bp8006359 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content63% 
IMG OID640562257 
Product3-oxoacyl-[acyl-carrier-protein] reductase 
Protein accessionYP_001243365 
Protein GI148258780 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0792782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTG TGGCGTTGGT GACGGGGGGA ACGCGCGGTA TTGGCGCAGC AATCAGCAAG 
GCACTGAAGG CTGCGGGACA TAAGGTCGCA GCGAACTATG GCGGCAACGA TGCCGCTGCG
GAGAAGTTCA AGAGCGAGAC CGAGATCCCC GTCTACAAAT GGGACGTCAG CTCATTCGAC
GCCTGCGCCG AGGGGATCAA GAAGGTCGAG GCCGAGCTCG GTCCTGTCGA CATTCTCGTC
AACAATGCCG GCATCACCCG GGACACGGCC TTTCACAAAA TGACGCTCGA GCAATGGAGC
GCGGTGATCA ACACCAATCT CGGCTCGCTG TTCAACATGA CCCGTCCGGT GATCGAGGGC
ATGCGCGCGC GCAAGTTCGG CCGCATCATC AACATCTCCT CGATCAACGG CCAGAAAGGT
CAGTTCGGCC AGGTGAACTA CTCCGCCGCG AAGGCGGGCG ACATCGGCTT CACCAAGGCG
CTGGCGCTGG AGACCGCCAA GGCCGGCATC ACCGTCAACG TGATCTGCCC CGGCTACATC
AACACCGAGA TGGTGCAGGC GGTGCCGAAG GACGTGCTCG AGAAGGCCAT CCTGCCGCTG
ATTCCGGTGG GCCGGCTCGG CGAGCCGGAA GAGATCGCGC GCGCCGTGGT GTTCCTCGCG
GCCGACGAGG CCGGTGCGAT CACCGGGTCG ACCTTGTCGA TCAATGGCGG CCAGTACATG
GCCTGA
 
Protein sequence
MARVALVTGG TRGIGAAISK ALKAAGHKVA ANYGGNDAAA EKFKSETEIP VYKWDVSSFD 
ACAEGIKKVE AELGPVDILV NNAGITRDTA FHKMTLEQWS AVINTNLGSL FNMTRPVIEG
MRARKFGRII NISSINGQKG QFGQVNYSAA KAGDIGFTKA LALETAKAGI TVNVICPGYI
NTEMVQAVPK DVLEKAILPL IPVGRLGEPE EIARAVVFLA ADEAGAITGS TLSINGGQYM
A