Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7607 |
Symbol | |
ID | 5154427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 7999220 |
End bp | 8000074 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640562251 |
Product | hypothetical protein |
Protein accession | YP_001243359 |
Protein GI | 148258774 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00689527 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.216662 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAACG GTCAGAACAA CAAGCGGATG CGCAACCGGA ATAGCGGTAA CAATAATAAT AACCGGCGCG GCCAGAACCC GCTGACCCGC GTGTTCGAAT CCAACGGGCC GGACATCAAG ATCCGCGGCA CCGCCTCCCA TGTGGCCGAG AAATATGTCC AACTCGCCCG CGACGCCCGC TCCTCGGGCG ACCCGGTGGC TGCCGAGAAC TACTACCAGC ATGCCGAGCA CTATTTCCGC CTGATTGCCG CCGCCCAGGA GCAGTTCCGC CAGAACCAGC CGCAGCAGCC GCGCAATACC GATGACCTGA CCGTTGACGA TCTCGATGAC GAGGGCGAGA GCTTCTCGCA TTTCGGCCAG GAGCCCGGTT TCGTTCCCGC GCAGCCGCAG CCTCAACCGT TCATGCGCGA GGGCGGCCAG CGCGAGCGCG GCGACAACCA GCCTCCCTAT CAGCGCGATC AGCAGCCGCG CGAGCACAGG GAAGCGCGTG AGCCGCGCGA ACCTCGTGAG CACCGCGAAC CCCGTGAGCA TCGCGAGCCC CGGGAGCATC GCGAGCCTCG GGAGCATCGC GAGCCGCGCG AGCATCGCGA ACGGGAGCCG CGCGAGCACC GCGAGCGTCC GCAGCCAGCC CAGTATCAGC CGCAACCGCA GCCGCAGCCG GTGATCGCCG ATAGCGGGGT CGACCGCCTG CCGTCCTTCA TCACCGGCCC GCAGCCGCAG ATCGCCAATG CGCCGGCGGC GTTCGAAGGT GCCGCTGAGC GCTATCCGCG TCGGCGCCGC CGCCCGCATG GTCCGCGTCC GGAAGCAGCC GCTGCCGCGC CGGCCCCGAG CGAAGACCTC AATCCGGGCG AGTAA
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Protein sequence | MRNGQNNKRM RNRNSGNNNN NRRGQNPLTR VFESNGPDIK IRGTASHVAE KYVQLARDAR SSGDPVAAEN YYQHAEHYFR LIAAAQEQFR QNQPQQPRNT DDLTVDDLDD EGESFSHFGQ EPGFVPAQPQ PQPFMREGGQ RERGDNQPPY QRDQQPREHR EAREPREPRE HREPREHREP REHREPREHR EPREHREREP REHRERPQPA QYQPQPQPQP VIADSGVDRL PSFITGPQPQ IANAPAAFEG AAERYPRRRR RPHGPRPEAA AAAPAPSEDL NPGE
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