| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7581 |
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| Symbol | gcd |
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| ID | 5155023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 7966278 |
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| End bp | 7968677 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640562226 |
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| Product | quinoprotein glucose dehydrogenase |
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| Protein accession | YP_001243334 |
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| Protein GI | 148258749 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.232583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.85577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCTG CCCGCGATCT GCAGCGTGCA CCGCTGCTGA CCTTCACTGC CGTCATCGTC
GGCCTGATGG GCCTTGCTTT GCTTGCCGGC GGCGCCTGGC TCGCGGCGAT CGGCGGCTCG
CTCTATTACG TCGTCGCAGG CGCCGCCCTG CTCGGCACCG CGTGGCTGCT GTGGCAGCGG
CGGGCTGCGG CGTTGTGGCT GTATGCAGCG CTGCTGCTGG GCACGATGAT CTGGGCGATC
TCTGAGGTCG GGCTGGATTT CTGGTCGCTG GCCCCGCGCG GCGACGTGCT GGCGCCGCTC
GGCGTCTGGC TGCTGCTGCC GTTCATCACC GCGCATTTGG TCGGCGACAT GCGCTCCGCG
CGCTGGGGTT TGGTCGCGGT GCTCGCGGTC GCCTTGGTCG TGCTCGGCGC CGCGCTCCAC
GGCGATCGTT TCGGGGTCAA TGGCGCTTTG CCGCAGGCTG CAGAGGCCTC GGCTGGCACC
GACACCGCGC CGGCCGAGGC GAAAGCCGAC TGGACCGCCT ATGGCGCCAG CAATTTCGGC
ACCCGGTTCT CGAGCCTGAA GCAGATCACC GCGGACAACG TGAAGAACCT CCAACTCGCC
TGGGAATTCC AGACCGGCGA CCACAAGGGC CCCGACGATC CCGACGAGTT CACCAACGAG
GTAACGCCGC TGAAGATCGG CGATCTGCTC TACACCTGCT CGCCGCACCA GATCGTGTTC
GCGCTGGACG CCGCCACCGG CAGACTGCGC TGGAGATTCG ATCCCAAGAT CGAGCACCAC
AAGAACTTCC AGCACATGAC CTGCCGCGGC GTCGCCTATC ACGAGACCAG GCCGGGCGCG
GTCGATATCG CAGGCGCCGC GGCGCCGGCC GAATGCGCCA GGCGCATCTT CCTGCCGACC
GATGACGGAC GGCTGTTCGC GCTCGATGCC GCCAGCGGCA AGCCGTGCGA GGGTTTTGGT
GCCCACGGCC AGATCGATCT CAAGGCCGGC AACGAGATCA CCACACTCGG CTTCTACGAG
GGCACGTCGC CGCCGGTGGT CACCGACAAG GTGGTGATCA TGGCGGGCGC CGTGATTGAC
AACTACTCCA ACAAGGTGCC GTCGGGCGCG ATCCGCGGCT TCGACGTCTA CACGGGCAAA
CTGCTGTGGG CGTTCGATCC CGGCAATCCC GATCCGAACG AGATGCCGTC GGCGACGCAT
CATTTCACGC CAGGCTCGCC GAATGGCTGG AGCGTCGGCG CCGCCGACGA AGCGCTCGGC
CTCGTCTACA TCCCGCTCGG CTCGAGCTCG CCGGACATCT GGGGCGGCAA TCGCTCGGCC
AACAATGAGC GCTACGATTC CGCGCTGGTG GCGCTCGACA TCGCCACGGG AAAGCTGCGC
TGGTCGTTCC AGAACGTGCA TCACGATCTC TGGGACATGG ACATGCCGTC GCAGCCGAGC
CTGGTCGACA TGCCCGGCAA GGACGGCGTG GTGCCGGCGA TCTACGTGCC GGCCAAGACC
GGCAACATCT TCGTGCTCGA CCGCCGCGAT GGCCATCTGT TGGTCCCCGC GCCGGAGAAG
CCGGTACCGC AGGGGGCTGC GCCCGGCGAC CGGCTGTCGC CGACGCAGCC GTTCTCCGAG
CTGAGCTTCC GCCCGCGCAA GGATCTCACC GGCGCGCAGA TGTGGGGCAC GACGATGTTC
GATCAGCTCG CCTGCCGCAT CATGTTCAAG CGGCTGCGCT ATGAGGGGCC GTTCACGCCG
CCGTCCGAGC AGGGCACGCT GGTGTTTCCC GGCGATTTCG GCATGTTCGA ATGGGGCGGC
ATCGCCATCG ATCCTGTGAG GAAGATCGCG ATCGCCAATC CGCAATCGAT CCCGTTCGTG
TCGCGGCTGG TGCCGCGCGG CAAGGACAAT CCGGCCGCGC CGAATTCGGC GCATCCGCCG
GGCACCGAGC TCGGCGTGCA GCCGATGTAC GGCACGCCCT ATGGCGTCGA GCTCGGCATC
TTCCTGTCGC CGCTCGGCAT CCCCTGCATG GCGCCGCCCT GGGGAAGTCT CGCTGCGATC
GACCTGAAGA CCAACCAGAT CGTCTGGCAG CACCGCGTCG GCACCATCCG CGACCAGGCG
CCGCTGCCGC TGCCGTTCAA GCTCGGCGTG CCGATGCTCG GCGGCCCGAT GGTGACCGCG
GGCGGCGTGG CCTTCCTGAC CGGCACGATG GACGACTATA TCCGCGCCTT CGACGTCAAG
GACGGCCGCC TGCTGTGGCA GGACCGGCTG CCCGCCGGCG GACAGTCCAC GCCCATGACC
TATGAGGCCG GCGGCAGGCA GTACATCGTG ACCGTGGATG GCGGCCACGG ATCGTTCGGC
ACCAGGCTCG GCGATTACGT CCGCGCCTAT GCACTGCCGG GCAACGTCGC CAGCCGCTGA
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| Protein sequence | MAAARDLQRA PLLTFTAVIV GLMGLALLAG GAWLAAIGGS LYYVVAGAAL LGTAWLLWQR
RAAALWLYAA LLLGTMIWAI SEVGLDFWSL APRGDVLAPL GVWLLLPFIT AHLVGDMRSA
RWGLVAVLAV ALVVLGAALH GDRFGVNGAL PQAAEASAGT DTAPAEAKAD WTAYGASNFG
TRFSSLKQIT ADNVKNLQLA WEFQTGDHKG PDDPDEFTNE VTPLKIGDLL YTCSPHQIVF
ALDAATGRLR WRFDPKIEHH KNFQHMTCRG VAYHETRPGA VDIAGAAAPA ECARRIFLPT
DDGRLFALDA ASGKPCEGFG AHGQIDLKAG NEITTLGFYE GTSPPVVTDK VVIMAGAVID
NYSNKVPSGA IRGFDVYTGK LLWAFDPGNP DPNEMPSATH HFTPGSPNGW SVGAADEALG
LVYIPLGSSS PDIWGGNRSA NNERYDSALV ALDIATGKLR WSFQNVHHDL WDMDMPSQPS
LVDMPGKDGV VPAIYVPAKT GNIFVLDRRD GHLLVPAPEK PVPQGAAPGD RLSPTQPFSE
LSFRPRKDLT GAQMWGTTMF DQLACRIMFK RLRYEGPFTP PSEQGTLVFP GDFGMFEWGG
IAIDPVRKIA IANPQSIPFV SRLVPRGKDN PAAPNSAHPP GTELGVQPMY GTPYGVELGI
FLSPLGIPCM APPWGSLAAI DLKTNQIVWQ HRVGTIRDQA PLPLPFKLGV PMLGGPMVTA
GGVAFLTGTM DDYIRAFDVK DGRLLWQDRL PAGGQSTPMT YEAGGRQYIV TVDGGHGSFG
TRLGDYVRAY ALPGNVASR
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