| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7575 |
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| Symbol | xerD |
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| ID | 5155789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 7958336 |
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| End bp | 7959262 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640562220 |
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| Product | tyrosine recombinase XerD subunit |
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| Protein accession | YP_001243328 |
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| Protein GI | 148258743 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.440547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.271837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGT TCCTCGACAT GATGGCCGCC GAACAGGGCG CTGGCCAGAA TACGCTGGAC
GCCTATCGCC GCGACCTCAG CGATCTGTCC GAGTTTCTCG CTGGCAAGGC GAACAGCTTC
ACCACCGCTG ACACCCAGGC GCTGCGCGAT TATCTCGCCG ATCTCGACAC GAGAGGCTTC
AAATCGTCCA GCGTGGCGCG GCGGCTGTCG GCGATGCGGC ACCTGTTCCG CTTCCTGCTG
AGCGAGCACA TCCGCAGCGA CGACCCCGCC GCCATCCTGT CCGGCCCCAA GCGCGGCCGT
CCCCTGCCCA AGGTGCTCTC GATCGGCGAT GTCGACCGGA TGCTGACCCG CGCCAAGGAG
CTGACCGAGA CCGCCGATGC GTCCCCGGCG CAACGGCTGC GGGCGCTGCG CCTGTATTGC
CTGCTCGAAG TGCTCTACGC GACCGGCCTG CGCGTCTCCG AACTGGTGGC GCTGCCGCGC
ACGGCGGCAC GCCATGACGC CCGCATGATC GTGGTGCGCG GCAAAGGCAA CAAGGAGCGG
CTGGTGCCGC TGAACCAGGC CTCGCGCCAG GCCATGGCGG ATTATCTGGC GGCGCTGGAT
GCGCTGAAGC CGGAGAAGAA GGCCAGCGCC ACCTTCGGCA AATGGCTGTT TCCCTCGTTC
GGCGAGAGCG GCCATCTGAC CCGACAGCAT TTCGCGCGCG ACCTCAAGGA ATTGGCGGTG
GCGAGCGGCC TGCCGGCCCG GCTCGTCTCA CCGCACGTGC TGCGCCACGC CTTCGCCAGC
CATTTGCTGC ACAATGGCGC CGACCTGCGC ATCGTCCAGA CACTGCTCGG CCATACCGAC
ATCTCGACCA CCCAGATCTA CACCCATGTG GTCGAGGAAC GGCTCAAGAG CCTGGTGCGC
GACCTGCACC CGCTCGCCGA GACCTGA
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| Protein sequence | MSLFLDMMAA EQGAGQNTLD AYRRDLSDLS EFLAGKANSF TTADTQALRD YLADLDTRGF
KSSSVARRLS AMRHLFRFLL SEHIRSDDPA AILSGPKRGR PLPKVLSIGD VDRMLTRAKE
LTETADASPA QRLRALRLYC LLEVLYATGL RVSELVALPR TAARHDARMI VVRGKGNKER
LVPLNQASRQ AMADYLAALD ALKPEKKASA TFGKWLFPSF GESGHLTRQH FARDLKELAV
ASGLPARLVS PHVLRHAFAS HLLHNGADLR IVQTLLGHTD ISTTQIYTHV VEERLKSLVR
DLHPLAET
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