| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7573 |
|---|
| Symbol | aroK |
|---|
| ID | 5155787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 7956936 |
|---|
| End bp | 7957649 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640562218 |
|---|
| Product | shikimate kinase |
|---|
| Protein accession | YP_001243326 |
|---|
| Protein GI | 148258741 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.456344 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAC CGACGCAATC CGCACCCAAC CCAGCCGCTC CGGAGGCCGC GATTACCGCG
GCTCTCGGCA AGCGGCTGAT CGTGCTGGTC GGCATGATGG GCGTCGGCAA GTCCACGGTT
GGCCGGCGGC TCGCGGCGCG GCTGCGGTTG CCCTTCGTCG ATGCGGATAC CGAGATCGAG
ACGGCGGCCG ACATGACAAT CCCGGAGATC TTCGAATCCC GCGGCGAGGA CTATTTCCGG
AATGGCGAGG CCCGCGTGAT CGCCCGCCTG CTGGAGAATG GTCCGGCGGT GCTGGCGACC
GGCGGCGGGG CCTTCATGCG CGAGGAGACG CGCCGCCGCA TCCACGAGAA GGCGGTCTCG
ATCTGGCTGA AGGCCGATGC CGACGTGATC ATGCGCCGGG TTCGCCGGCG GGCCGATCGG
CCGCTGCTGC AGACCGCCGA TCCTGAAGGC ACGGTCGCGC GGCTCTTGAG CGAACGCGAG
CCGGTCTACC AGCTCGCCGA CCTCACGATC TGCTCGCGCG ACGTGCCGCA CGACCGTGTG
GTCGAGGATT GCATCGAAGC GCTGCAGGCG TTGCTGTTGC CCGCGCCGGA GGCCGAGGTC
CAGCCTGCCA CGCCGCAATC CGATCCGGGC CAGACCGATC CCGTCCAGGC GGATCCGGTT
CAGGCGGATT CCATGCAGAC CGATTCCATG CAGGCGATGA GCGCGCTCCG ATGA
|
|---|
| Protein sequence | MIEPTQSAPN PAAPEAAITA ALGKRLIVLV GMMGVGKSTV GRRLAARLRL PFVDADTEIE
TAADMTIPEI FESRGEDYFR NGEARVIARL LENGPAVLAT GGGAFMREET RRRIHEKAVS
IWLKADADVI MRRVRRRADR PLLQTADPEG TVARLLSERE PVYQLADLTI CSRDVPHDRV
VEDCIEALQA LLLPAPEAEV QPATPQSDPG QTDPVQADPV QADSMQTDSM QAMSALR
|
|---|
| |