Gene BBta_7562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7562 
SymbolnamA 
ID5154416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7944522 
End bp7945634 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content66% 
IMG OID640562207 
ProductNADPH dehydrogenase 
Protein accessionYP_001243315 
Protein GI148258730 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.649512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCC TGTTTACTCC GATCAAGCTG CGTGGCCTCG AACTCGCCAA CCGCATCGTT 
GTCTCGCCGA TGTGTCAGTA TTCGGCCGAG AATGGCGCCG CCAATGACTG GCACTTCACC
CACATCAACA CGCTTGCGCT GTCAGGCGCG GCGATGTTCT GCATCGAGGC GACGCATGTC
GAACCGATTG GACGCATCAC GCCGGGCTGC CTCGGCCTGT GGGACGATGC GACCGAAGCG
GCGCTGGTGC CGATTCTGAC ATCGGTGCGC AAGCATTCGA AGACGGCGAT TGCGATGCAG
CTCGCCCATG CCGGCCGCAA AGGGTCCAGC CATAAGCCTT GGGATGGTGG CCAGCAGATT
GCTCCCGCGA GCGGCGGGTG GCAGACGGTC GCACCTTCAG CCGTGCCCCA CAAAGACGGC
GAGCTTGCCC CAGAGGCGCT CGATACCGAC GGCTTGGCGC GCATCCGCGA CGCCTTCGTT
TCGGCAGCGC AGCGGGCTGC GCGGCTCGGC ATCGATGCGA TCGAGCTGCA TGCTGCGCAC
GGCTATCTGC TGCATCAGTT CCTGTCGCCG CTCGCTAACC GGCGCAGCGA CGCCTATGGC
GGTTCGCTGG AAAACCGCAT GCGGTATCCG CTCGAGCTCT TCGATGCCGT GCGCAGCGTG
TTCCCGGCCG ACAAGCCGGT GGGCGTGCGG GTGTCGGCGA CAGACTGGGT CGACGGCGGT
TGGGATCTCG ACCAGACCAT CGTCTTCGCG CAGGAGCTCA AGCGCCGCGA CGTCGATTGG
ATCGACGTGT CCTCGGGCGG CGTGTCGCCG TTGCAGAAGA TCACCCTCGG GCCCGGCTAT
CAGGTGCCGT TCGCGGCGGC CGTGAAACAA GCGACGGGAC TTCCGACCAT GGCGGTCGGC
CTCATCACGC AGGCGCAGCA AGCCGAGGAG ATCGTTGCAT CAGGCAAGGC CGACATGGTC
GCGCTCGCCC GCGGCATGCT CTACGATCCG CGCTGGGGCT GGCATGCCGC GGCCGAACTC
GGCGGGCAGG TGGCCGCGCC TCCGCAATAT TGGCGCTCGC AACCGTCGAC GCAGAAGGAG
CTATTCGGCC GAACGACGTT CGGCGCACGT TGA
 
Protein sequence
MSVLFTPIKL RGLELANRIV VSPMCQYSAE NGAANDWHFT HINTLALSGA AMFCIEATHV 
EPIGRITPGC LGLWDDATEA ALVPILTSVR KHSKTAIAMQ LAHAGRKGSS HKPWDGGQQI
APASGGWQTV APSAVPHKDG ELAPEALDTD GLARIRDAFV SAAQRAARLG IDAIELHAAH
GYLLHQFLSP LANRRSDAYG GSLENRMRYP LELFDAVRSV FPADKPVGVR VSATDWVDGG
WDLDQTIVFA QELKRRDVDW IDVSSGGVSP LQKITLGPGY QVPFAAAVKQ ATGLPTMAVG
LITQAQQAEE IVASGKADMV ALARGMLYDP RWGWHAAAEL GGQVAAPPQY WRSQPSTQKE
LFGRTTFGAR