| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7558 |
|---|
| Symbol | |
|---|
| ID | 5154893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 7940783 |
|---|
| End bp | 7942330 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640562204 |
|---|
| Product | putative dipeptide ABC transporter (substrate-binding protein) |
|---|
| Protein accession | YP_001243312 |
|---|
| Protein GI | 148258727 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.864379 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAC GGGTATTGCT GGGTGTCGCC ATCGGCTGCG TTCTGTCCGC GGCTCATGCT
GAGGAGCCGA AGTCGGGCGG TGTCGTCAAT GCTGTCATCC AGCCCGAGCC TCCCGGTCTG
ATGCTGGCCA TGGTCCAGAA CGGCCCGACC CAGATGGTGT CCGGTAATAT TTTCGAGGGC
CTGCTGCGCT ACAGTCCCAA GCTCGAACCG TTGCCCGGCC TCGCAGAGAG CTGGACGATC
AGCCCGGACG CGAAGGTCTA CACCTTCAAG CTCAAGCCCG GCGTGACCTG GCATGACGGC
AAGCCGTTCA CCTCGGCCGA CGTGCTGTTC TCGATCGAGA TGTTGAAGCA GACCCATGCG
CGCGCCCGCA ACAACCTCGT GATGGTCGAT AAGGTCGAGG CGCCGGATGA TCTCACCGTG
GTGTTCACCT TGAAGGAGCC GTTCGGTCCC TTCATCGGCA TCTTCGAGGT CGGTTCGATG
CCGATGGTCC CGAAGCATCT CTATGAAGGG ACCGACTTCA AGACCAATCC GAACAACAAC
GCGCCCATCG GCACCGGGCC CTTCATGTTC AAGGAGTGGC AGAAGGGATC GTTCATCCGC
ATGGTGAAAA ATCCGAACTA CCACGAGAAG GGCAAGCCCT ATCTGGACGA GGTCTATTGG
CAGATCATTC CGGATGCGGC GGCGCGCGCC GTGGCGTTCG AAACCGGCAA GGTCGACGTG
CTGCCGGGCG GCTCGATCGA GAATTTCGAC GTGCCGCGCG TCTCCAAGCT GCCCGGCGCC
TGCGTCACCG GCGCCGGCTG GGAGTTCTTC TCGCCGATAT CCTGGATGTG GCTGAACCTC
CGCAATCCGA TTCTCGCCAA CAAGAAGGTG CGGCAGGCGA TCATGTATGC CATCGATCGC
GACTTCGCCA AGGACGTGAT CTGGAACGGG CTCGGCAAGG TCGCGACCGG CCCGTCGGCT
TCGACCATCA AGTTCTACAC TGACGACGTG CCGAAATATC CGTACGATCC GGCCAAGGCC
AAGGCGCTGT TGAAGGAGGC CGGCTACAAG GGCGAGAAGA TCCGCATGCT GCCGCTGGCC
TATGGCGAGA CCTGGCAGCG CTGGGGCGAG GCGGTGAAGC AGAACCTGCA GGACGTCGGC
ATGACGATCG AGACCATCGC GACCGATGTT CCCGGCGGCA ACCAGAAGAT CATGGAGTGG
GACTACGATC TCGCCTTCAC CTATCTCTAT CAGTACGGAG ATCCCGCGCT CGGCGTGTCC
CGCAACTACA TCACCTCGGC CATCGCCAAG GGGCAGCTGT TCAACAATGT CGAGGGCTAT
TCGAATCCGG AGGTCGACAG GCTGTTTGCC GAGGGGGCGA CCGCGCCGAC CGACGCCAAG
CGCAAGGAAG CCTATGAGAA GGTGCAGAAG ATCCTCGTCG AGGACGTGCC CGTCGCCTGG
CTTCTGGAGC TGCAGTTCCC GACGATCACC AAGTGCAAGG TGAAGAACCT GATCACCACG
GGCGTCGGCG TCAACGACGG TTTCCGGGAC GCCTGGCTCG ACAAATAG
|
|---|
| Protein sequence | MLKRVLLGVA IGCVLSAAHA EEPKSGGVVN AVIQPEPPGL MLAMVQNGPT QMVSGNIFEG
LLRYSPKLEP LPGLAESWTI SPDAKVYTFK LKPGVTWHDG KPFTSADVLF SIEMLKQTHA
RARNNLVMVD KVEAPDDLTV VFTLKEPFGP FIGIFEVGSM PMVPKHLYEG TDFKTNPNNN
APIGTGPFMF KEWQKGSFIR MVKNPNYHEK GKPYLDEVYW QIIPDAAARA VAFETGKVDV
LPGGSIENFD VPRVSKLPGA CVTGAGWEFF SPISWMWLNL RNPILANKKV RQAIMYAIDR
DFAKDVIWNG LGKVATGPSA STIKFYTDDV PKYPYDPAKA KALLKEAGYK GEKIRMLPLA
YGETWQRWGE AVKQNLQDVG MTIETIATDV PGGNQKIMEW DYDLAFTYLY QYGDPALGVS
RNYITSAIAK GQLFNNVEGY SNPEVDRLFA EGATAPTDAK RKEAYEKVQK ILVEDVPVAW
LLELQFPTIT KCKVKNLITT GVGVNDGFRD AWLDK
|
|---|
| |