| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7554 |
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| Symbol | rpsU |
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| ID | 5155183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 7936899 |
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| End bp | 7937198 |
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| Gene Length | 300 bp |
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| Protein Length | 99 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640562200 |
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| Product | 30S ribosomal protein S21 |
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| Protein accession | YP_001243308 |
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| Protein GI | 148258723 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0828] Ribosomal protein S21 |
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| TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.190009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCAGGTTC TGGTTCGTGA CAATGACGTC GACAAGGCGT TGCGCATCCT GAAACGGAAG
ATGCAGCGCG AAGGTGTCTT CCGCGAAATG AAGCGCCGCA GAGCCTATGA GAAGCCGTCG
GAGCGCAAGA CGCGCGAGAA GTCGGATGCG ATCCGGCGCC AGCGCAAGGT GGCCCGCAAG
CAGGCCATTC GCGAGGGGCT GCTGCCCGCT CCCGTGAAGA AGATATTGCA GCCACGACCG
CCGCGCGGGC TGCCGCCGAG CTCCGCACCT ACGACTGGCA GCGGTCCTGC AAGGGCTTAG
|
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| Protein sequence | MQVLVRDNDV DKALRILKRK MQREGVFREM KRRRAYEKPS ERKTREKSDA IRRQRKVARK
QAIREGLLPA PVKKILQPRP PRGLPPSSAP TTGSGPARA
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