| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7520 |
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| Symbol | |
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| ID | 5153929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 7900475 |
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| End bp | 7904008 |
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| Gene Length | 3534 bp |
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| Protein Length | 1177 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640562168 |
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| Product | outer membrane autotransporter domain-containing protein |
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| Protein accession | YP_001243277 |
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| Protein GI | 148258692 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCGT CTGCGTATCT GAAGGTCTGG AAATATGCCG CGCTGGGCTC GGCGCTGCTG
CCCATCGCCG CAAAGGCCGG CGACATCCCG ACCACGCCCC CGGTGAACTT CACCAATTCC
AGCACCGCGA CGGTCGGCTC GACCATGGTC AACGTGGTCG ATGCCTATAC CAACCTGATG
CTGAACGATC CGAAGCTGAC CAACGGCACA GGCGTCATGG AGCAGAACCT CGCGACCGTG
ATCCGCATGA CCAATGCGCG CACGGCGGCG CAGACCCTGG AGGCGATCCA TGACGACCGC
ACCAGCCAGC AATACAGCGT GCTGAACGGC CTCGGCGTTC TCACCGGCTA TTTCATGACT
GGCACCGGCG CATCCGCCAG CACCACCCCG ACCAGCCTGA CGCCGACCAC CTACGCGCCG
TACACGCTGC AGAACTTCCA GTCCAACATC AACTATCTGA ACAGCGCGAG CTGGGGCGCC
ACCAGCTTCG GCAACGGCAC AGCAACGCCG CTCGCCTCCG CCGTCAACTT CGTCAACAAT
GTCGTGCGCG CCAACTCGTC GACCGAGCCT TCCAAGCGCA CTTTCGAGCG CTACATGGGC
TCGACCGCGC CGGTCACCAC CCCGTCCGCC TTGGGTGCAT CGGTCAACCA GACCACGGTG
AGTCCGCTCG CGGCGGCGTT CAGCAACTAC AACGCCACCA CCAAGACCGG GCTCTCCACC
GCCGACACCG CCAACATCGT CGTCCCTTCC TATTACGGCA ATCTCACGGT GCCTGCGGTC
TATGGCAACG TGACCAATTG GGTGCGCGGA TTCACCGTGA CCCAGGCGAT GATCGACGCG
CAGAACGTGG CGAACGGCAC CAGCCTCGGC TATCTCACCG TGCCGAATGT CGGCACCATC
GTGAACGGCG TGCTGCAGCC GACTCAGTTC AATGTCGGCG ACTACGTGCC CGGCGTCGGC
GCGTCGGCGC GGCCCTACCG GCTGTCGACC GACGTCAACG TGCCCACGCC GTTGCTGCAG
ATCATCAACA GCACCAACCC CTATGCCGAT GGCGGCTTCA TCAGCGGCCA CACCAATTCC
GGCTACACGC AGGCGCTCGG GCTCGCCTTC CTGGTGCCGC AGGAATATCA GAGCCTGCTG
GCGCGCGCGG CCGATCTCGG CAACAACCGC ATTCTCGCCG GCATGCACTC GCCGCTCGAC
GTGATCGGCG GCCGCATGTT CGCGACCGCG GTCGCCGCGA CCAACATCTA TAATTCGCTG
TATGATGCCA ACGGCAACCG GCTGGATTGG ACCAATCCCG CCAATGCCAG CGCCTATGCT
GTGTACCAGG CCTATACCCA GACGCAGTCC TACCTGTCGC AATCCTGCGG CACGGTCAGC
GTGCAGGCCT GCATCCTTCA GAGCCAGGGC GGCGCGGCGG CGATCGCGGC ATCCTCGAAG
GACGTGAATC TCAGCAACGC TGATCCGTCG AGCTACACCT ATCGCATGAC CTATGGGATG
CAGCTCGCCG GCGCCAGCAC GACCTTGCCG GAGACCGTGC CGGTGCAGGC GCAGGTGCTG
CTGCTGACGC GCTTTCCCTA TCTGAGCGAC GCACAGCGCA CCGAAATCCT GCGCACGACG
GCGCTGCCGT CCGGCTACGC TCTGCTGGAC GGCAACACCT GGGACGGCTG GGGCCGCATC
AACCTCTACA AGGCAGCCTA TGGCTATGGC GCGTTCGACA GCGCCGTCAC CGTCAGCATG
GACGCGGCGC AGGGCGGCTA CAACGCCTTC GACATTTGGA GCAACGATAT CTCGGGGGCG
GGATCTCTGA CCAAGAGCGG CTCCGGCACG CTCGTGCTCG CCGGCGCCAA CAGCTATAGC
GGCGGCACCA CCGTCAACGG CGGCACGCTG GTCGTCGCGG CCGGCGCCAC GGTCACGAGC
CCGGTCACCG TCAATGCGGG CGGCACACTG AGTGGCCTCG GCACGGTCGG CGACGTCAGC
GTCGCCGGCA CCTTGGCGCC GGGCTACCAG GCGGTCACCG GCCTCACCGG CCAAGCCGGC
AAGCTCAACG TGCTCGGCAG CCTCGCCTTC ACCAGCGGCG CGACCTACGC GCTGCAGCTC
ACGCCCGGCA GCTTCAGCAC CACGAGCGTC TCCGGCACGG CGACGTTGGC GGGCCAGGTC
ACGGCGACAT TCGCCGGCGG CATCTACGCG GCCGGCAGCA GACTCGCGAT CGTCTCGAGC
GGCCGCGGCG TGAGCGGCCG CTTCGCGGGC TTGAGCACCA CGATGACCGG CCCCACCAAC
GTGGCGCCGA GCCTGAGCTA TGACGGCCAG AACGCCTATC TCACGCTGAA CCAGGCGGCG
CTGCCGTCGC TGCCGGCGAC CGGCGTGAAT GGCAATGGGC AGCAGATCTA TGCTGCGCTC
AACAACGCGG TCAGCAAAGG CGGCACGCTG CCGGTGTCGC TGCAGTCGAT CTACTTCCAG
AATGCCGCAG GCGTTGGGGC CGTCTTCAAT CAGCTCGCAA GCCAGAGCGC GCCGGCCGCG
ACCCAGAGCC TCGGCCAGAG CATGACCGGC TTCATGACCA CGGTGCTCGA TTTCGGCAGC
GGCGGCCGCG CCGGCGGCTT CGCATCGACC GGCAGCTCGC CGATGATGGC CTATGCGGAC
GCAACCGGCG GCCCGAGCAC GAAGGCGGCG AAGATGTTCG CCAAGGCGAT GCCGGCGGAG
CCGGGCTGGG CGGTGTGGGG GTCGGCGTTC GGCGGCGGCG GCCATATCGG CGGCGACACA
GCGGCAGGCA GCCAGGACGT CTCGTCGCGA ATCTATGGCT TGGCAACCGG CGCCGATTAT
CGGCTGGCGC CGGACATGAC CGTCGGCTTC GCGCTGTCGG GCGGCCAGAC CAGCTTCAAC
GTCGCGCAAG GCGGCGGCTA TGGCAGCTCG GATTTCATCC AGGCGGCGGC CTATGCGACC
AAGCGCTTCG GCCAGGCCTA TCTCTCCGGC AGCCTCGCCG CCGGCGCGCA TTGGATGTCG
ACGACCCGCA ACCTTGCGAC CGGCGCCGCC GAGACGTTGC GGGCGAGCTA CACGGCTCCG
ACGCTCGCCG CGCGGGCCGA GGCCGGATAC CGCTTCGATC TCGGCTGGAG CAGCCTGACG
CCCTACGCCG CGCTGCAGCT GCAGCAGGTT TGGAGCCCGT CCTATACCGA GACCAGTTCG
CTTAGCGCCA ACGGCTCGGC GCTCAGCTTC GCCGCCCGCG ACACGACCTT GCCGCGCACC
GAGCTTGGCG TCTGGGCCGA TCGCCGCATC TCCGAGACCT TCCTGCTGCG CGGTCGGGCG
GCCTGGTCGC ACGATTACAA TCACGATGCG ACGGTGACGG CGACATTCCA GACCTTGCCG
GGCGCGAGTT TCGTGACCAC CGGCGCGCGG ATCGCGGCGG ATTCGGCGCT GCTGTCCGGT
GTCGCCGAGG TCGCGCTGAC CTCGCGTCTG TCGCTGTCCG GGCAGATCGA CGGCCAGTTC
GCGCCGTCGG CCACAACCTG GGCCGGCACC GGCCGGCTGC GCTATCAATG GTGA
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| Protein sequence | MSSSAYLKVW KYAALGSALL PIAAKAGDIP TTPPVNFTNS STATVGSTMV NVVDAYTNLM
LNDPKLTNGT GVMEQNLATV IRMTNARTAA QTLEAIHDDR TSQQYSVLNG LGVLTGYFMT
GTGASASTTP TSLTPTTYAP YTLQNFQSNI NYLNSASWGA TSFGNGTATP LASAVNFVNN
VVRANSSTEP SKRTFERYMG STAPVTTPSA LGASVNQTTV SPLAAAFSNY NATTKTGLST
ADTANIVVPS YYGNLTVPAV YGNVTNWVRG FTVTQAMIDA QNVANGTSLG YLTVPNVGTI
VNGVLQPTQF NVGDYVPGVG ASARPYRLST DVNVPTPLLQ IINSTNPYAD GGFISGHTNS
GYTQALGLAF LVPQEYQSLL ARAADLGNNR ILAGMHSPLD VIGGRMFATA VAATNIYNSL
YDANGNRLDW TNPANASAYA VYQAYTQTQS YLSQSCGTVS VQACILQSQG GAAAIAASSK
DVNLSNADPS SYTYRMTYGM QLAGASTTLP ETVPVQAQVL LLTRFPYLSD AQRTEILRTT
ALPSGYALLD GNTWDGWGRI NLYKAAYGYG AFDSAVTVSM DAAQGGYNAF DIWSNDISGA
GSLTKSGSGT LVLAGANSYS GGTTVNGGTL VVAAGATVTS PVTVNAGGTL SGLGTVGDVS
VAGTLAPGYQ AVTGLTGQAG KLNVLGSLAF TSGATYALQL TPGSFSTTSV SGTATLAGQV
TATFAGGIYA AGSRLAIVSS GRGVSGRFAG LSTTMTGPTN VAPSLSYDGQ NAYLTLNQAA
LPSLPATGVN GNGQQIYAAL NNAVSKGGTL PVSLQSIYFQ NAAGVGAVFN QLASQSAPAA
TQSLGQSMTG FMTTVLDFGS GGRAGGFAST GSSPMMAYAD ATGGPSTKAA KMFAKAMPAE
PGWAVWGSAF GGGGHIGGDT AAGSQDVSSR IYGLATGADY RLAPDMTVGF ALSGGQTSFN
VAQGGGYGSS DFIQAAAYAT KRFGQAYLSG SLAAGAHWMS TTRNLATGAA ETLRASYTAP
TLAARAEAGY RFDLGWSSLT PYAALQLQQV WSPSYTETSS LSANGSALSF AARDTTLPRT
ELGVWADRRI SETFLLRGRA AWSHDYNHDA TVTATFQTLP GASFVTTGAR IAADSALLSG
VAEVALTSRL SLSGQIDGQF APSATTWAGT GRLRYQW
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