| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7513 |
|---|
| Symbol | |
|---|
| ID | 5153778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 7890057 |
|---|
| End bp | 7892117 |
|---|
| Gene Length | 2061 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640562162 |
|---|
| Product | ATP-dependent DNA helicase Rep |
|---|
| Protein accession | YP_001243271 |
|---|
| Protein GI | 148258686 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.556127 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGGCCG TTGCGGCGAC ATATCTCGAC GATCTCAATC CGGAGCAGCG CCGTGCCGTC
GAGCATGGCG GCGCTTGCGC CGCACCGGGT CCGCCGCTGC TGATCATCGC CGGCGCGGGC
TCGGGCAAGA CCAACACGCT GGCGCATCGT GTCGCGCATC TGCTCGTCAA CGGCGCCGAT
CCGCGCCGCA TCCTGCTGAT GACATTCTCG CGCCGCGCCG CCGCCGAGAT GAGCCGCCGC
GTCGAGCGCA TCGCCCGCAA GGTGCTCGGC GGCCAGGCCG AGGCGATCAC CGCGGGACTG
ACCTGGGCCG GCACGTTTCA CGGGCTCGGC GCGCGGATGC TGCGCGACTA CGCCGAGCGC
ATCGGCATCG ATGCGGTCTT CACCATCCAT GATCGCGAAG ATTCCGCCGA CCTGATGAAT
TTGGTGCGGC ATGAGCGCGG CCTGTCCAAT ACGCAGCGGC GCTTCCCGAC CAAAGGCACC
TGCCTTGCGA TCTACTCGCG CTGCGTCAAT GCCGACATGA CGCTGGACGA GGCGCTGGTG
CGGCATTTTC CGTGGTGCAC GGAATGGGCG GCCGAGCTGA AGGGGCTGTT CGCGGCCTAT
GTCGAAGCCA AGCAGGCGAA CGCTGTACTC GACTATGACG ATCTGCTGCT CTACTGGGCG
CAGATGATGG CCGACGAAAC CATCGCGCGC GAGATCGGCG AGCGCTTCGA CCACGTGCTG
GTCGACGAGT ACCAGGACAC CAACCGACTG CAGTCGCAGA TTCTGCTCGG CTTGAAGCCT
GACGGCGTGG GGCTCACGGT CGTCGGCGAC GACGCGCAGT CGATCTACGC GTTCCGCGCC
GCCACCGTGC GCAACATCCT GGAATTTCCC GATCAGTTCA GCCCGCGCGC CGACATTGTC
ACGCTCGACC GCAACTATCG CTCGACCCAG CCGATCCTCT CCGCCGCCAA TGCCGTGATC
GGACTGGCGC GCGAGCGCTT CACCAAGAAT TTGTGGACCG ACCGCACCGC GTCGCGCAAG
CCGCAACTGG TGAGCGTGCG CGACGAGGCC GACCAGGCGC GCTACATCGT GGAACAGGTG
CTGGCCAAGC GCGAAGAAGG CATCGTGCTG AAGCAGCAGG CGGTGCTGTT CCGGACGTCG
TCGCATAGCG GGCCGCTGGA GGTCGAGCTG ACCCGCCGCA ACATCCCGTT CGTGAAGTTC
GGCGGGCTGA AGTTCCTCGA TGCGGCGCAT GTCAAGGATA TGCTGGCCTG CCTGCGCTTC
ATCGAGAACC CGCGCGACCG CATCGCCGGT TTCCGGGTGC TGCATCTGAT CCCCGGCATC
GGCCCCGCCT CGGCACAGCG GCTGCTCGAC GCCGCCGGCG ACAACGTCGA TCCGATCGGT
GCGCTGTGCG CGCAGCCGGC GCCGGCGCGC GCCGGCGAGG ATTGGACGGC GTTCATACGC
ACCCTGGAGC AGTTGCGGAT CTCGGACTGG CCGGCCGATA TCGAGCGCGT CAGGCACTGG
TATCAGCCGC ATCTCGAGCG CGTTCATGAG GACGCCGAGA TGCGCAGCGC CGACCTGCTG
CAGCTGGAGC AGATCGCGAG CGGCTATCCC TCGCGCGAGC GCTTCCTCAC CGAGCTGACG
CTCGACCCGC CCGACGCGAC CTCTGACCAG GCCGGCGTGC CGCTGCTCGA CGAGGACTAT
CTGATCCTGT CCACCATCCA TTCCGCGAAA GGCATGGAGT GGAATTCGGT GCACGTCCTC
AACGTCGTCG ACGGCTGCAT GCCGTCCGAT CTCGGCGCCG GCTCCAGCGC CGAATTGGAG
GAGGAGCGCC GGCTGCTCTA TGTCGCGATG ACCCGCGCCA AGGACGACCT GCATCTGCTG
GTGCCGCAGC GCTTCTTCGT TCACGGCCAG CCGGTGCGCG GCGATCGTCA TGTCTACGCC
TCACGCACGC GGTTCATTCC GGAGGCCCTG GTGACGCTGT TCGACCGCAT CAGCTGGCCG
CGCGCGCAGC CGGGCGCGAC ATATGCCAGC CAAGGCCCGC GCATCGACCT CGGCGCGCGC
ATGCGCGAGC GCTGGCGGTG A
|
|---|
| Protein sequence | MQAVAATYLD DLNPEQRRAV EHGGACAAPG PPLLIIAGAG SGKTNTLAHR VAHLLVNGAD
PRRILLMTFS RRAAAEMSRR VERIARKVLG GQAEAITAGL TWAGTFHGLG ARMLRDYAER
IGIDAVFTIH DREDSADLMN LVRHERGLSN TQRRFPTKGT CLAIYSRCVN ADMTLDEALV
RHFPWCTEWA AELKGLFAAY VEAKQANAVL DYDDLLLYWA QMMADETIAR EIGERFDHVL
VDEYQDTNRL QSQILLGLKP DGVGLTVVGD DAQSIYAFRA ATVRNILEFP DQFSPRADIV
TLDRNYRSTQ PILSAANAVI GLARERFTKN LWTDRTASRK PQLVSVRDEA DQARYIVEQV
LAKREEGIVL KQQAVLFRTS SHSGPLEVEL TRRNIPFVKF GGLKFLDAAH VKDMLACLRF
IENPRDRIAG FRVLHLIPGI GPASAQRLLD AAGDNVDPIG ALCAQPAPAR AGEDWTAFIR
TLEQLRISDW PADIERVRHW YQPHLERVHE DAEMRSADLL QLEQIASGYP SRERFLTELT
LDPPDATSDQ AGVPLLDEDY LILSTIHSAK GMEWNSVHVL NVVDGCMPSD LGAGSSAELE
EERRLLYVAM TRAKDDLHLL VPQRFFVHGQ PVRGDRHVYA SRTRFIPEAL VTLFDRISWP
RAQPGATYAS QGPRIDLGAR MRERWR
|
|---|
| |