| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7507 |
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| Symbol | |
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| ID | 5153444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7882174 |
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| End bp | 7883067 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640562156 |
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| Product | putative TRAP-dicarboxylate transporter, periplasmic component (DctP subunit) |
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| Protein accession | YP_001243265 |
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| Protein GI | 148258680 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.84783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCGG TGGCGTATAA TGCGCAGCCG CAAAGCCCGC AGCAGATGGC TGCGGACGAG
GTCCGCGCCA AGCTTATTGG AGCGGCCGGC AAGTCTTTCG TCGTCGATGA GCGCGGCGGC
GGCGCGCTCG GCAGCGAGAC GGCGATCCTG GCGGCAACGC GCAGCGGCGC GGTCGACGTC
TCCGTGCTCT CCGGGCCAGT CCTTGGCCCG GTGGTGCCGG AAATGGGCAT GTTCGACATT
CCATTCCTGT TCCGCGATGC AGCTCATGCC AAGGCCGTGG CCGAAGGGCC GGTCGGCGCC
GGGGTGGCCG CCAAGTTCGC CGACAAGGGT CTTGTGCTGC TCGCGGTCGG GCTGCATGGC
TTTCGCAACA TCACTAACTC AAAGCGGCCG ATCATCACGC CGGACGACGT GAAGGGCCTG
AAAATCCGAG TGCTGCCGAA TGCCGTCTAT CAGATGACGT TCAAGGCGCT CGGCGCCGAC
GTCGTGCCGA TGGATTTCCC ACTGGTCTAT GCCGCGCTCA AGGACGGCCG GCTTGACGGC
CAGGAGAATC CGATCGCGAC CATCGCGTCG AGTCGCTTCG ACGAGGTTCA GAAGCATCTC
ACGCTCACCG GTCATTTCTT CTCGCCGGTC GCCATCGTCG CCAACCGAGC GATGTTCGAG
CAGCTCGACC CGTCCGAGCG TAGCGCGCTC ATCGCAGCTG CCAAAGGCGC GGCTGAGGTG
ACGTGGACGT CGAAGATCAA TACGGAGAAA CTCGACCTGT TGCGCCAAAA AGGCATGCAG
GTGGTCGAGA CATTCGATCG CAGGGCCTTT GTCGAAGCGA TGAAGCCGCT CGAGCCGGAG
TTCGAGAAGC GCTTCGGCAA GGAAGCGCTT GCCGCGATCC GATCCACGCC TTGA
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| Protein sequence | MLSVAYNAQP QSPQQMAADE VRAKLIGAAG KSFVVDERGG GALGSETAIL AATRSGAVDV
SVLSGPVLGP VVPEMGMFDI PFLFRDAAHA KAVAEGPVGA GVAAKFADKG LVLLAVGLHG
FRNITNSKRP IITPDDVKGL KIRVLPNAVY QMTFKALGAD VVPMDFPLVY AALKDGRLDG
QENPIATIAS SRFDEVQKHL TLTGHFFSPV AIVANRAMFE QLDPSERSAL IAAAKGAAEV
TWTSKINTEK LDLLRQKGMQ VVETFDRRAF VEAMKPLEPE FEKRFGKEAL AAIRSTP
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