| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7458 |
|---|
| Symbol | |
|---|
| ID | 5152521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 7833542 |
|---|
| End bp | 7834762 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640562112 |
|---|
| Product | putative sensor histidine kinase with ATP-binding region |
|---|
| Protein accession | YP_001243221 |
|---|
| Protein GI | 148258636 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCTGCG AACATATCTT AGGTGACGTA ATGATGCCGC CTCACGCCAA AGCTCAGGGC
GTTGACGAGC CGAACGCGCC CGCACACCCG AACCGGGCGC GCCGCTTTGC TCGGCCATGG
GCATACTTTG TCTCCCGCCT GGACCCGCGA CCACAGGCCC TCTTCTCGCC GATGCTACCG
ATCTTCACGG CAGCACTCGC CATCGCCATC TTCATTTTCG ACACGGTCAC ACCCTACGAA
ATCGCGGCCG CGAGCCTCCA GGTCGTGGTC GTCCTCCTGT CCCTGCGCTT TTGCCGGAAA
CAAGGCGTCA TCTTCGTGTC GCTAGGCTGT GCCGCGCTCA GCATCCTCAG CGCCGTACTT
ACCATCGTGA GCTATGTTCC AACCGCCGGG AGCACCTTCA GTCTCGGTGT CATCAACACG
TCGATCAGTC TGACTGCGAT CGCAGCAACT GCTTACCTCG CGCTGGCTAC CGAGACCGCC
CGCCAGACGG CTGAACGCGC GCAAGCGCAC CTCGCCCACG TGGCTCGTCT GACAACACTT
GGCGAGATTT CCGCCTCAAT CGCTCACGAG CTGAACCAAC CCCTGACGGC GGTCATCACG
AATGCGAATG CCGCCACACG CTGGATCCGC AGTGAGCCGC CAAATCCGCA GAAGGTCACG
AGTTCGATCG AAAGCATCGT CGAGGACGCA CGGCGCGCGA GTGAGATTAT CGCTCGAATT
AGAGCCCTGA CCACACGCGC TGAACCCCAA AACGCATGGG TCGACATCAA CGCGGTGATA
CAAGAGGTGC TTGTCCTCAT CCAGTCTCAG TTGAACGAAA ACCGCATCGT GGTCCGAGCT
GAACTTAACA ACGGCCTGCC GAGCGTCTTC GGTGACCGAA TCCAATTACA GCAAGCCGTT
CTCAACCTCA TCGTCAACGC CATCGACGCA ATCGGTGCTG CACAAGCAGA CCCCCGAGAA
ATTCGCATTA GATCACGCAA GACACGGCCG AGTGGCGTCG AGGTCAGCAT TGAGGACACC
GGCGGCGGAC TGACTACGAC TGATGTCAAT CAGATCTTCG ATGCATTCTT TTCGACGAAG
ACCGGGGGCA TGGGCATCGG TCTCTCGATC TGCCGCTCGA TCATTGAAGC TCATCATGGC
CGCATCTGGG CCGAAAAGGG CGAGCCTTCA GGAGCCACCT TCCACTTCAC GCTGCCTGGG
ACTCAGGAGG CAAACCAATG A
|
|---|
| Protein sequence | MSCEHILGDV MMPPHAKAQG VDEPNAPAHP NRARRFARPW AYFVSRLDPR PQALFSPMLP
IFTAALAIAI FIFDTVTPYE IAAASLQVVV VLLSLRFCRK QGVIFVSLGC AALSILSAVL
TIVSYVPTAG STFSLGVINT SISLTAIAAT AYLALATETA RQTAERAQAH LAHVARLTTL
GEISASIAHE LNQPLTAVIT NANAATRWIR SEPPNPQKVT SSIESIVEDA RRASEIIARI
RALTTRAEPQ NAWVDINAVI QEVLVLIQSQ LNENRIVVRA ELNNGLPSVF GDRIQLQQAV
LNLIVNAIDA IGAAQADPRE IRIRSRKTRP SGVEVSIEDT GGGLTTTDVN QIFDAFFSTK
TGGMGIGLSI CRSIIEAHHG RIWAEKGEPS GATFHFTLPG TQEANQ
|
|---|
| |