| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7447 |
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| Symbol | |
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| ID | 5151516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 7821966 |
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| End bp | 7822646 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640562103 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_001243212 |
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| Protein GI | 148258627 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.143707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGAC GATCGACCGT GCGCTATGGC AAGACGCCGG ACGCGGAGAC GCCATATCAA
AAGGCCGGCC AGGTCTGGGA CGAGCGGATT GGCTCCGCGC GCGTTCAGGC CAAGAACTGG
CGCCTGGCTT TCTTCGGCGC ACTCGTTCTC AGCGGTGGGC TCGCCGGCGG CCTGGTCTGG
CAATCGGCCC GCGGCACCAT CACGCCTTGG GTTGTGCAGG TTGACAAGCT CGGCCAGGCC
CAGGCCGTCG CGCCCGCCAC CGCGGACTAC CAGCCGACCG ACCCGCAGAT CGCGTGGCAC
TTGGCGCGCT TCATCCAGGA AGTGCGCGGC ATCCCCGCCG ACCCCGTGGT GCTGCGTCAG
AACTGGCTCG ACGCCTACAA CTACGTCACG GACAAGGGGG CGCTCGCGCT CAATGACTAT
GCGCGGACGA GCGATCCGTT TTCCAAGGTC GGCAAGAACC AAGTCTCCGT CGACGTCGCG
AGCGTCATCC GCGCCTCCGA CTCCAGCTTT CGCGTCGAAT GGACGGAGCG TCATTACATC
GACGGCGCGC TTGCCTCGAC TGAGCGATGG AGCGCCATCC TCACCATCGC GCTGCAGATG
CCGACCGACG CCGATCGGCT GAAGAAGAAT CCGCTCGGCG TCTACGTCCA CGCCCTCAAT
TGGTCAAAGG AGCTCGGCTG A
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| Protein sequence | MFRRSTVRYG KTPDAETPYQ KAGQVWDERI GSARVQAKNW RLAFFGALVL SGGLAGGLVW
QSARGTITPW VVQVDKLGQA QAVAPATADY QPTDPQIAWH LARFIQEVRG IPADPVVLRQ
NWLDAYNYVT DKGALALNDY ARTSDPFSKV GKNQVSVDVA SVIRASDSSF RVEWTERHYI
DGALASTERW SAILTIALQM PTDADRLKKN PLGVYVHALN WSKELG
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