| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7443 |
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| Symbol | |
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| ID | 5152452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 7817208 |
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| End bp | 7819637 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640562099 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_001243208 |
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| Protein GI | 148258623 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTG CCGAGTATCG TCGCCATAAC CAGAGCCTCG CCGACTTCCT GCCGTGGGCG
GCGCTCGTCG CCAAGGGCGT TGTTCTCAAC AAGGATGGCT CCTTCCAGCG CACCGCACGC
TTTCGCGGTC CAGACTTGGA TTCTTCCACG CCCGCCGAGT TGGTGGCCAT CACGTCGCGT
CTCAATAATG CGTTGCGTCG CCTTGGCTCC GGCTGGGCCG TGTTCATTGA GGCCCAGCGC
GTGCCGGCGC ACAGGTATCC GTCAACTCAA TTTCCGGATC CCGTTTCGGC GCTGGTCGAT
GCCGAACGTC GAGCCCAATT CGAAGAAGAA GGCGCGCATT TCGAGAGCGG CTACTTCCTG
ACACTGCTCT GGCTGCCGCC CGCCGATGAC GCGGCCCGCG CGGAAGCTTG GCTCTATGAG
AACCGCGCCC AGGGCGCCGC CGACTGGCGT GCCACGCTCG AAGGTTTCGT CGACCGCACC
GATCGCGTGC TCGCGCTGCT CGAAGGCTTC ATGCCGGAAT CGGATTGGCT CGATGACGCC
GAGACCCTGA CCTACCTGCA TTCCTGCATC TCGACGCGGC GCCAGCGCGT GCGCGTGCCG
GAAACGCCGA TGTACCTCGA CGCCATCCTG GTGGACGAGG ACCTGACGGG TGGCCTCGAA
CCACGGCTCG GCCGCGCACA TCTGCGCACG CTCACCATCA TGGGCTTTCC ATCACAGACT
TGGCCGGGCC TGCTCGACGA CCTCAATCGC CTGGCGTTTT CCTATCGCTG GGCGACACGC
GCCATCTGCC TCGACAAGAC CGACGCGGCC AAGCTCCTCG GCAAGATCCG CCGTCAGTGG
TTCGCCAAGC GCAAGAGCAT CATGGCGATC CTCAAGGAGG TGATGACCAA CGAGGCGTCG
GTGCTGATGG ACTCCGACGC CGCCAACAAG GCGCTCGATG CCGACGCCGC TCTGCAAGAA
CTTGGCACCG ACCTCGTCGG CGAGGCCTAC GTCACCGCCA CTGTTACCGT CTGGGACGAT
GATCCGCGGA TCGCGGACGA GCGCCTTCGC CTGGTCGAGA AGGCCATTCA GGGCCGCGAC
TTCACCTGCA TGCGCGAAGG CGTCAACGCG ATCGAAGCCT GGCTTGGGTC TCTCCCAGGG
CATGTCTACG CCAATGTCCG GCAGCCGCCG ATCTCCACGC TCAACCTCGC GCATATGATG
CCGTTTTCGG CGGTTTGGGC CGGGCCTGAA CGGGACGAGC ACTTCCAGGC GCCGCCGCTT
CTCTTCGCCA AGACCGAGGG ATCGACCCCG TTCCGCCTCA GCCTCCATGT CGGGGATGTC
GGCCACACCT TGATCGTCGG CCCGACGGGC GCCGGCAAGA GTGTGCTGCT CGCGTTGATG
GCCTTGCAGT TCCGGCGCTA TGCCGGTGCA CAGGTCTTCG CCTTCGACTT CGGCGGCAGC
ATCCGGGCGG CGGCGCTCGC GATGGGCGGC GATTGGCACG ATCTCGGCGG AGCGCTCTCC
GACAGCGCCG CCGAGCCCGT CGCGCTCCAA CCGCTCGCGC GGGTCGATGA TCCCGGAGAG
CGCGCGTGGG CCGCCGAATG GGTCGCGGCG CTCCTCGGTC GCGAGTCCGT CACCGTCACT
CCGGAACTGA AGGAACACCT ATGGTCAGCG CTGACTTCGC TTGCGTCCGC GCCTATCCAG
GAGCGCACCA TCACCGGGCT CTCGGTGCTC CTGCAATCAA ATGCCCTGAA ACAGGCGATC
CAGCCCTACA CCGTGGCAGG CCCCTGGGGA CGACTGCTCG ACGCCGAGAC GGAGCGGCTC
GGCGAGGCCG AAGTCCAGGC TTTCGAAACG GAAGGGTTGA TCGGCGCGGG CGCGGCTCCA
GCCGTCCTAT CCTATCTCTT CCATCGCATC GAAGATCGCT TCGACGGCCG ACCCACCTTG
CTCATCGTCG ACGAAGGTTG GCTCGCCCTC GACGATCCCG GCTTCGCCGG GCAACTGAGA
GAGTGGCTGA AGACGCTTCG GAAAAAAAAT GCCAGCGTCA TCTTTGCCAC GCAGTCGCTT
GCCGACATCG ACGGCAGTGC GATCGCACCA GCCATCATCG AGAGCTGCCC GACCCGCATC
CTGCTTCCCA ACGAGCGCGC GCTCGAGCCG CAGATCGCGG CGATCTACCA GCGCTTCGGT
CTCAACGATC GCCAAATTGA GATTCTGAGC CGCGCGACGC CGAAGCGCGA ATATTACTGC
CAGTCGCGAC GCGGCAATCG CCTATTCGAA CTCGGGCTGT CCGAAGTCGC GCTCGCCTTC
ACCGCCGCCT CGGCGAAATC CGATCAGACC GCCATCGAAG AGCTGCTCGC GGAACACGGC
CGCGGCGGCT TCACCGCCGC CTGGCTGCGC CGAAAGGATC TCGACTGGGC AGCGGACATG
CTCACCCACA ACCAGGAGAC CACGTCATGA
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| Protein sequence | MNLAEYRRHN QSLADFLPWA ALVAKGVVLN KDGSFQRTAR FRGPDLDSST PAELVAITSR
LNNALRRLGS GWAVFIEAQR VPAHRYPSTQ FPDPVSALVD AERRAQFEEE GAHFESGYFL
TLLWLPPADD AARAEAWLYE NRAQGAADWR ATLEGFVDRT DRVLALLEGF MPESDWLDDA
ETLTYLHSCI STRRQRVRVP ETPMYLDAIL VDEDLTGGLE PRLGRAHLRT LTIMGFPSQT
WPGLLDDLNR LAFSYRWATR AICLDKTDAA KLLGKIRRQW FAKRKSIMAI LKEVMTNEAS
VLMDSDAANK ALDADAALQE LGTDLVGEAY VTATVTVWDD DPRIADERLR LVEKAIQGRD
FTCMREGVNA IEAWLGSLPG HVYANVRQPP ISTLNLAHMM PFSAVWAGPE RDEHFQAPPL
LFAKTEGSTP FRLSLHVGDV GHTLIVGPTG AGKSVLLALM ALQFRRYAGA QVFAFDFGGS
IRAAALAMGG DWHDLGGALS DSAAEPVALQ PLARVDDPGE RAWAAEWVAA LLGRESVTVT
PELKEHLWSA LTSLASAPIQ ERTITGLSVL LQSNALKQAI QPYTVAGPWG RLLDAETERL
GEAEVQAFET EGLIGAGAAP AVLSYLFHRI EDRFDGRPTL LIVDEGWLAL DDPGFAGQLR
EWLKTLRKKN ASVIFATQSL ADIDGSAIAP AIIESCPTRI LLPNERALEP QIAAIYQRFG
LNDRQIEILS RATPKREYYC QSRRGNRLFE LGLSEVALAF TAASAKSDQT AIEELLAEHG
RGGFTAAWLR RKDLDWAADM LTHNQETTS
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