Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7438 |
Symbol | traG |
ID | 5151928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 7813075 |
End bp | 7815057 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640562094 |
Product | conjugal transfer coupling protein TraG |
Protein accession | YP_001243203 |
Protein GI | 148258618 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.291662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.932105 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGA CCAAAATACT CTGGCTGCAA GTCTTCGTTG TGTGCTCGAC CACGCTCGGC TTCGTCTGGG CCGCGACGCA ATGGACGGCG TGGCAGCTTG CCTTCCAGCC GCAGCTCGGC AGCCCCTGGT TCTCGCTCTT CGGATGGCCG GTCTATTTCC CGGTGGCCTT CTTCTGGTGG TGGTTCTCTT TCGACGCTTA CGCACACGAC ATTTTCGTCA CCGGCGGCTT CATCGCTGGC GCAGGCGGGG TCGCTGCCTT CGTCGTCGCG GTCGCCATGT CGGTCTGGCG TGCGCGCGAG GTAAAGCGCG CCACGACCTA CGGTTCGGCT CGCTGGGCCG AGGAACGCGA GATCCGCGCA GCCGGCCTTC TTCACCCAGA TGGCGTATTG CTCGGCCGCT GGCACGGAGC CTACCTCCGT CACCATGGGC CCGAGCATGT GCTGTGTTTC GCACCGACCC GAAGCGGCAA GGGCGTCGGT CTTGTTGTTC CGACGCTGCT GACCTGGCCG GGAAGCTGCA TCGTCCATGA CATCAAGGGG GAGAACTGGA CGCTCACCGC CGGCTGGCGT GCGCGGTTCG GCCGCGTGGT CCTGTTCGAT CCGACCAATC CGCAAAGCAG CGCTTACAAT CCTTTGCTCG AGGTCCGGCG CGGTGAGTTT GAAGTCAGAG ATGTCCAGAA CATCGCCGAC GTGCTGGTTG ATCCCGAAGG GGCACTGGAA CGCAGGAACC ATTGGGAGAA GACCAGCCAT TCGCTTCTGG TCGGCACGAT CCTGCATGTC CTTTACGCCG AACCCGACAA GACGCTCGCC GGCGTCGCCA ATTTCCTCTC CGATCCGAAG CGACCAATCG AGAAGACGCT TCGGGCGATG ATGACCACGC CGCATCTCGG CGAGAAGGGA GTCCATCCCG TCGTCGCCAG CGCCGCGCGA GAGCTGTTGA ACAAGAGCGA GAACGAGCGC AGCGGCGTAC TGTCGACCGC GATGTCCTTC CTGGGCCTCT ATCGAGATCC GGTGGTCGCG GCGGTCACAC AACGCTGCGA CTGGCGCATC CGCCACCTGG TCGAGGCTGA GCATCCGGTG ACGCTCTATC TCGTCGTGCC ACCCTCGGAC ATCAGCCGCA CGAAACCGCT CGTGCGCCTC ATCCTCAACC AGATCGGAAG ACGGCTAACC GAAGAGCTAG AGAACAAGCG GCGGCGACAT CGCCTGCTGC TGATGCTCGA TGAGTTTCCC GCGCTCGGCA GGCTCGACTT CTTCGAGTCG GCATTGGCGT TCATGGCGGG CTATGGATTG AAATCCTTCC TGATCGCGCA GTCGCTGAAC CAGATCGAGA AGGCGTACGG TCAGAACAAT TCCATCCTGG ACAATTGCCA CGTGCGCGTC TCGTTCGCCA GCAACGACGA ACGCACGGCG AAACGCGTGT CGGATGCACT TGGCACGGCC ACCGAAATCC GAGCGATGAA AAACTATGCC GGCAGCCGAC TCAGTCCGTG GCTTGGACAT CTGATGATCT CCCGGCAAGA AACCGCGCGG CCGCTGTTGA CTCCCGGCGA GATCATGCAG CTCCCGCCCG ACGACGAGAT CGTCATGATA TCGGGAAGTG CGCCCGTCCG GGCGAAGAAA GCTCGGTATT ACGAAGACCC CGAGCTCGCC GGGCGGATTC TTCCGCCGCC CAGATCATCG GGCGGAAACG CTGTTCTTCG ACCGCCAGCC CCCAACATGT CCCAGGTGAA TACCTGGAGC GGCGCGATCG CGTCAGCGCC AACCGCCGCA GAGACGGACG ATCCGGACAA TGCGGGAATC CGGCGCGAAC CCGAACTTCC GGACCATGAG GAGATTGTTC CCGAGCCACG AAAGCCGGTG CAGGAATTCG AGCCCGTCGA GGACGAGCCA GACGACGACG CCCAGCGCCA GCGGATCATG CAGCGCAATT TCGGCAGCGC GCGACAAATC TCGCTCGACG CGGACGATGA CATGCAGATG TAG
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Protein sequence | MNPTKILWLQ VFVVCSTTLG FVWAATQWTA WQLAFQPQLG SPWFSLFGWP VYFPVAFFWW WFSFDAYAHD IFVTGGFIAG AGGVAAFVVA VAMSVWRARE VKRATTYGSA RWAEEREIRA AGLLHPDGVL LGRWHGAYLR HHGPEHVLCF APTRSGKGVG LVVPTLLTWP GSCIVHDIKG ENWTLTAGWR ARFGRVVLFD PTNPQSSAYN PLLEVRRGEF EVRDVQNIAD VLVDPEGALE RRNHWEKTSH SLLVGTILHV LYAEPDKTLA GVANFLSDPK RPIEKTLRAM MTTPHLGEKG VHPVVASAAR ELLNKSENER SGVLSTAMSF LGLYRDPVVA AVTQRCDWRI RHLVEAEHPV TLYLVVPPSD ISRTKPLVRL ILNQIGRRLT EELENKRRRH RLLLMLDEFP ALGRLDFFES ALAFMAGYGL KSFLIAQSLN QIEKAYGQNN SILDNCHVRV SFASNDERTA KRVSDALGTA TEIRAMKNYA GSRLSPWLGH LMISRQETAR PLLTPGEIMQ LPPDDEIVMI SGSAPVRAKK ARYYEDPELA GRILPPPRSS GGNAVLRPPA PNMSQVNTWS GAIASAPTAA ETDDPDNAGI RREPELPDHE EIVPEPRKPV QEFEPVEDEP DDDAQRQRIM QRNFGSARQI SLDADDDMQM
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