| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7436 |
|---|
| Symbol | |
|---|
| ID | 5151307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 7810376 |
|---|
| End bp | 7810969 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640562092 |
|---|
| Product | putative soluble lytic murein transglycosylase precursor |
|---|
| Protein accession | YP_001243201 |
|---|
| Protein GI | 148258616 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.467676 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGAGG CCTCGCAGCG CTTCGGCATT CCGACAACGT GGATGCGGGC CGTGATGCGC
GCCGAGAGCT TCGGCGACGT ACACGCGATA TCGCCGAAAG GGGCGATGGG CTTGATGCAG
ATCATGCCGC AAACCTGGGC GACACTGCGA CAACGCTACC ATCTCGGCGC TGATCCCTAC
GACGTCCATG ACAACATCAT CGCCGGTGCC GGCTATCTGC GCGAACTGCA CGACCGCTAT
GGGGTTCCCG GCTTCCTTGC GGCCTACAAC GCCGGTCCAG CGCGCTGGGA AGATCATCTC
GCCACCGGCC GCCCGTTGCC GGCGGAAACG CGCGCTTACC TGACCAGGCT CGCGCCCATT
GTCGGTGGCA GCGTGATCGA CGACACGACA TTGCTCGCGT CCGTCGTCCG ATCATGGACC
GAGGCATCGT TGTTTCCAAA ACAGCCGTCC ACCGCATCGG ACGACACAAC GAAGACCGGC
GGGCCGCAGT CGTCCAACGC GCCGAGCGTC CGTTCGCCGC AGGATTGGAC CGGACTCGCA
CCGCAAGCCG ACGGGCTCTT CGTCGTGCTG TCGTCTGATC GACGAACCCC ATGA
|
|---|
| Protein sequence | MAEASQRFGI PTTWMRAVMR AESFGDVHAI SPKGAMGLMQ IMPQTWATLR QRYHLGADPY
DVHDNIIAGA GYLRELHDRY GVPGFLAAYN AGPARWEDHL ATGRPLPAET RAYLTRLAPI
VGGSVIDDTT LLASVVRSWT EASLFPKQPS TASDDTTKTG GPQSSNAPSV RSPQDWTGLA
PQADGLFVVL SSDRRTP
|
|---|
| |