| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7435 |
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| Symbol | |
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| ID | 5151306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 7809657 |
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| End bp | 7810148 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640562091 |
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| Product | putative conjugal transfer protein precursor |
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| Protein accession | YP_001243200 |
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| Protein GI | 148258615 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.622204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGT ATCTGGTGCT GCTCGTCTCC GCCTGCAGCG CGATCTTCCC TGTCTCGCCC
AAATTCATTT GGAACGCCAG CGACAGCGTG CCGATCGGCC TCTACGCCAT CCACTCTGTC
GGCGCGCTCC ACGTCACCCA ACTTGTCGTC GTGCGTCCAC CGGACGCCCT GGCCCAATTC
CTCTCCGACC GCCGTTATTT GCCCAAGGGC GTGCCCATGC TGAAGCGTGT GCTCGCGCTT
CCAGGCCAGA CGGTATGCCG CCGCCAGCGC ACCATCACCG TCGACGGCAT AGCGATGGGC
GATGCGCTCG ATCGCGACAC GCACGATCGA CCGCTGCCCG TCTGGCAAGG CTGCCAGCGC
ATTCCCGACG GCCAGGTCTT CCTCATGAAC TGGCAATCCG CAGACTCGCT CGACGGCCGT
TATTTCGGGC TGCTTTCCCG CACGACGATC GCCGGCCGCG CCGACCCGAT ATGGACGCGG
GAGGAGGACT GA
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| Protein sequence | MTTYLVLLVS ACSAIFPVSP KFIWNASDSV PIGLYAIHSV GALHVTQLVV VRPPDALAQF
LSDRRYLPKG VPMLKRVLAL PGQTVCRRQR TITVDGIAMG DALDRDTHDR PLPVWQGCQR
IPDGQVFLMN WQSADSLDGR YFGLLSRTTI AGRADPIWTR EED
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