| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7376 |
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| Symbol | |
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| ID | 5150587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7749823 |
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| End bp | 7752033 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640562036 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001243145 |
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| Protein GI | 148258560 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCCCG TTCGGCCAAT TAAGCCCAAG AAGCTCAATC GCGTGCCCCG TGCTCGTGAT
GCAATCCGCC CGGTCAAGCC AACCCCGAAG CTGGCACAGC ACAACCTGGG GACGACTGCC
GTCATCGATG AGGTCGCCGG CAGACGTGCC GAGGCGGAAG CCGCGATCGC CGAGGCGGAG
AAGGCTCACG ACCGGCTGAT CGAGGCGATC GACATTCTCC CCGAAGGGAT CGTGTTCCTC
GATTCCGAGG GCCGCTACAT CCTCTGGAAC AAGAAATACG CCGAGATCTA CAATCGCAGC
TCGGATCTCT TCAAACCCGG TGCCCGGCTG CAGGACACGA TCCGGATCGG CGTGGCGCGT
GGCGACTATC CGGAAGCCGT CGGGCGCGAG GATGAATGGG TCGCGGAGCG TCTCGAGAAG
CTGTTTCGAC CGAAGGGCCG CCACGAGCAG AAGCTGGCGG ATGGCCGCAC GATCCTGATC
GATGAGCGGC TCACCAGTGA CGGCGGGATC GTCGGTCTGC GGGTCGACAT CACCGAGCTG
AAGCAGCGGG AGGAATCATT CCGGCTGCTG TTCGACGGCA ATCCGGTGCC GATGATCGTA
TGCGCCAGGA GTGACGGCCG TGTGCTCGGC GTCAACGAGG CGGCCGCCCA GCATTACGGC
TACAGCCGGG CGGCATTCGA GCAGCTCAAC ATCCGCAATC TGCAGGCCTA TGAGAGCGAA
CCGCCCTGGG CGGCGGAGCA TTCCGGTGAG GAGCAGGCGG CCCGGACCTG GAAGCATGTT
CGTGCCGACG GCGCCCTGAT CGACCTCGCG ATCTACTCGC GCCATCTGGT TCACAACGAA
CAGCCTGCCG TGCTGCTGGC GCTGATGGAC ATCACCGAGC GCAAGCGCGC CGAGGCGCGG
CTGGCCTTCC TGGCGCAGCA TGATGCGCTG ACGGGCCTTC CGAGCCGAAA CCTGCTGCGT
CAGAAGATCG AGGACAAGCT TGGGCAGATG CGGCGCGGTT CCGAGAAGAT GGCGGTGCTG
GTGCTCGGGC TCGATAATTT CAAATCGATC AATGACACGC TGGGGCATGC CGCCGGCGAC
CGGTTGCTGC GTGGGGTCGG CAAGCGGCTG CGCTCCATCC TGCGCCAGGA GGACGTTGTC
GCGCGCTTGA ATTCGGACGA GTTCGCCATC GTCCATGGCG GGCTGGCCCG GCCGGAGGAT
GCGGCCCAGC TTTGCCGGCG GCTGCTGCAG GCGATCGCCG ATCCCTATCT GATCGACGGC
AGCTCCGTGA CCATCGGGGC GACCGTTGGC ATCGCGATGG CGCCGAATGA CGGTGACGAT
GCCGAGAAGC TGCTGAAGAA CGCCGACATG GCGCTGTCGC GGGCCAAGAC CGAGACGCGC
GGCAGCTTCA GCTATTTCGA GACCGGAATG GATGCACGCG CGCAAAGCCG GCGCAAGATT
GAGATCGAGC TGCGGGACGC CATCCAGCGC GATGTGTTGC AGCCTTATTA TCAGCCGCTG
ATCGACCTCT CGACCGGACG CATCACCGGC TTCGAGGCAT TGGTGCGTTG GCCGCATCCG
GAGCGCGGCA TGATCCCGCC ATCCGAATTC ATCCCGGTCG CCGAGGACAC CGGCCTGATC
TCCGCGCTCG GTCGCGTCAT GCTGCGCCGG GCCTGCAATG ATGCCGCGAA CTGGCCGGAC
GAGGTTCGGG TCGCGGTCAA CATGTCGCCG CTGCAGTTCC GCGTCGGCAA CGTGCTGTCG
TTGGTCATGG ACGTGCTGAA GCAGTCGGGC CTGCCGCCGA GCCGCCTCGA GCTCGAGATC
ACCGAGACGC TGGTGCTCGA GAAGAGCGGC CAGGTGCTGG CGACGCTGCA TGCGCTACGC
GCGCTCGGCG TGCGCATCTC GATGGACGAT TTCGGCACCG GCTATTCCAG CCTGAGCTAT
CTGCGCAGCT TCCCCTTCGA CAAGATCAAG GTCGATCAGT CGTTCATCCG CGATCTCGCC
GCCAACCGCG AGGCCCAGGC GATCGTCCGC TCCATCGTCA GCCTCGGCAA GGGGCTCGGC
GTGACCATCA CGGCGGAGGG CGTCGAGACC GAAGCGGAAC TGCGCTGTCT GCGCGCCGAA
GGCTGCCATG AGGGGCAGGG CTATTTGTTC AGCCGTCCCC GGCCCAACGC CGAGATCGTC
GGCCTGCTCG AGGCGCAATC GGCGGCCGAT CGCCGGGTGA TGGTGGCCTG A
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| Protein sequence | MRPVRPIKPK KLNRVPRARD AIRPVKPTPK LAQHNLGTTA VIDEVAGRRA EAEAAIAEAE
KAHDRLIEAI DILPEGIVFL DSEGRYILWN KKYAEIYNRS SDLFKPGARL QDTIRIGVAR
GDYPEAVGRE DEWVAERLEK LFRPKGRHEQ KLADGRTILI DERLTSDGGI VGLRVDITEL
KQREESFRLL FDGNPVPMIV CARSDGRVLG VNEAAAQHYG YSRAAFEQLN IRNLQAYESE
PPWAAEHSGE EQAARTWKHV RADGALIDLA IYSRHLVHNE QPAVLLALMD ITERKRAEAR
LAFLAQHDAL TGLPSRNLLR QKIEDKLGQM RRGSEKMAVL VLGLDNFKSI NDTLGHAAGD
RLLRGVGKRL RSILRQEDVV ARLNSDEFAI VHGGLARPED AAQLCRRLLQ AIADPYLIDG
SSVTIGATVG IAMAPNDGDD AEKLLKNADM ALSRAKTETR GSFSYFETGM DARAQSRRKI
EIELRDAIQR DVLQPYYQPL IDLSTGRITG FEALVRWPHP ERGMIPPSEF IPVAEDTGLI
SALGRVMLRR ACNDAANWPD EVRVAVNMSP LQFRVGNVLS LVMDVLKQSG LPPSRLELEI
TETLVLEKSG QVLATLHALR ALGVRISMDD FGTGYSSLSY LRSFPFDKIK VDQSFIRDLA
ANREAQAIVR SIVSLGKGLG VTITAEGVET EAELRCLRAE GCHEGQGYLF SRPRPNAEIV
GLLEAQSAAD RRVMVA
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