| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7363 |
|---|
| Symbol | glgP |
|---|
| ID | 5149835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 7732591 |
|---|
| End bp | 7735098 |
|---|
| Gene Length | 2508 bp |
|---|
| Protein Length | 835 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640562024 |
|---|
| Product | glycogen phosphorylase |
|---|
| Protein accession | YP_001243133 |
|---|
| Protein GI | 148258548 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0058] Glucan phosphorylase |
|---|
| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.221944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAGATC AGCCGTCCCA GCGCAGTTTC GTAAGCACCG GCCAGCCCGT CGATGAATTG
GCCGTGGCTG AGATCAAGAG CGACATCCTG GCCAAGCTCC GGCTCGCGAT CGGCAAGGAA
GCGAGCCAGG CGACGCCGCA GGACTGGTAC CACGCTGCAG CCCTGACCTT GCGCGACCGC
ATCGTGCATC GCTGGCTGAC CGCCGACAAA GAGAGCTACG ATGCCGGGCG CAAGCGCGTT
TATTACCTCA GCCTCGAATT CCTGATCGGC CGTCTGTTCA CCGACGCGCT CAACAATATG
GGCCTGATGA AGGTGTTCGA GACCGCGCTC GGTGATCTCG GCGTCGGCCT GATGGACCTG
CGCAAATGCG AGCCCGACGC CGCGCTCGGC AATGGCGGTC TTGGACGGCT TGCGGCCTGC
TTCATGGAAA GCATGGCGAC CGTGCAGATC CCCGCGATCG GCTACGGCAT CCGCTATGAT
TTCGGCCTGT TCCGCCAGGT GATCATCGAC GGCTGGCAGC ACGAATTTCC CGACGTCTGG
CTGTCCTTCG GCAATCCCTG GGAGTTCCAG CGCCCGGAGG TGGTCTACCA CGTCCATTTC
GGCGGCGGCG TCGAGCATGT CGACGACAAG GGCCGCGACC GCGCCATCTG GCATCCCGGC
GAGACCGTCC AGGCCGTCGC CTACGACACG CCGATCGTCG GCTGGCGCGG CCAGCACGTC
AATGCGCTCA GGCTGTGGTC GGCGCGCTCG CCCGATCCGC TGAAGCTCGA CGTGTTCAAC
TCCGGCGACT ATCTCGGCGC ATCGGCGGAA GAGGCGCGGG CGGAGGCGAT CTGCAAGTTC
CTCTATCCCA ATGACGAGAG CCCCGCCGGC CGCGAGCTGC GGCTGCGGCA GGAATATTTC
TTCGTCTCGG CCTCGCTGCA GGATCTCGTC AAGCGGCATC TCGGCTCCGA CGGCCAGTTG
CGCAGCCTGG CGCAGAAGGC CGCGGTGCAG CTCAACGACA CCCATCCCTC GCTCGCCGTC
GCCGAGCTGA TGCGCATCCT GGTCGACCTG CACAATTTCC GCTGGGACGA GGCGTGGAAG
ATCACGGTCG CGACGCTGTC CTACACCAAC CACACGCTGC TGCCGGAAGC GCTCGAGACC
TGGCCGGTCG AACTGTTCGA GCGACTGCTG CCGCGGCACC TCGAAATCAT CTACCGCATC
AACGCCCAGC ATCTCGCGCT CGCCGAACAG CGCGCCCCGG GCGACATCGA ATATCGCGCC
TCGGTGTCCC TGATCGACGA AAAGAGCGGC CGCCGCGTGC GCATGGGCCA GCTCGCTTTC
GTCGGCTCGC ACCGCATCAA CGGCGTCTCG GCGATGCATT CGGACCTGAT GAAAGAGACC
GTGTTCCACG ATCTCAACCA TCTCTATCCC GGCCGCATCA CCAACAAGAC CAACGGCATC
ACCTTCCGCC GCTGGCTGAC GCTCGCCAAT CCGAAGCTGA CCAGCCTGTT GTGCGAAGCC
TGCGGCGACG CCATCGTCGA CGATCCGACC CTGCTGTCGA GCCTCGAGAG CTACGTGGCC
GACAGCGGCT TTCAGCAGAA GTTCCGGGCG GTGAAGCGGC ACAACAAGCT GCAGCTGGCG
CGCCTGATCG GCGAGCGGAT GAATGTCAGG ATCGATCCCG GCGCGCTGTT CGACGTGCAG
ATCAAGCGCA TCCACGAATA CAAGCGGCAG CTGCTGAATA TCCTCGAGGC GATCGCGCTC
TATCAGGACA TCAAGGACAA CCCGCAGGCG GACTGGGTGC CGCGGGTCAA GATCTTCGCC
GGCAAGGCCG CGGCGAGCTA TCGCTACGCC AAGCTGATCA TCAAGCTGAT CAACGACGTC
GCCGAACTCG TCAACAATGA TCCGGCGATC GATGGCCGGC TCAAGGTCGT GTTCCTCGCC
GACTACAATG TCAGCCTGGC GGAGGCGATC ATTCCTGCGG CCGATCTCTC CGAGCAGATC
TCGACGGCCG GCATGGAGGC CTCCGGCACC GGCAACATGA AGCTGGCGCT GAACGGCGCC
ATCACCATCG GCACGCTCGA CGGCGCCAAT ATCGAGATCC GCGACAATGT CGGCGCCGAC
AACATCGCGA TCTTCGGCAT GGAGGCCGAT GACGTCATGC TCCGGCGCAA GCAGGGCCTG
GACGCAACGG ATGTGATCCG CCGTTCGCCG CGGCTCGCCC GGGCGATCGA CGCAATCGCC
TCCGGCCTGT TCTCGCCGGG TGAACCGGGC CGCTTTGAGC CGATCGCGCA CGCGCTGCGC
CATCTCGACC ACTACATGGT CTCGGCCGAT TTCGATTCCT ATTATGAGGC CCAGCGCGGC
GTGGACGCCC GCTGGCGGAC GGCGCCGGCC TGGACCCGCG CCTCGATCCT CAACGTCGCG
CGCATGGCGT GGTTCTCCTC CGACCGCACC ATCCGCGAAT ATGCCGACGA CATCTGGAAC
GTGCCGGTCG GCCCGATCCA GGCGCCGGCG CACGCGCGGC GGGCGTGA
|
|---|
| Protein sequence | MTDQPSQRSF VSTGQPVDEL AVAEIKSDIL AKLRLAIGKE ASQATPQDWY HAAALTLRDR
IVHRWLTADK ESYDAGRKRV YYLSLEFLIG RLFTDALNNM GLMKVFETAL GDLGVGLMDL
RKCEPDAALG NGGLGRLAAC FMESMATVQI PAIGYGIRYD FGLFRQVIID GWQHEFPDVW
LSFGNPWEFQ RPEVVYHVHF GGGVEHVDDK GRDRAIWHPG ETVQAVAYDT PIVGWRGQHV
NALRLWSARS PDPLKLDVFN SGDYLGASAE EARAEAICKF LYPNDESPAG RELRLRQEYF
FVSASLQDLV KRHLGSDGQL RSLAQKAAVQ LNDTHPSLAV AELMRILVDL HNFRWDEAWK
ITVATLSYTN HTLLPEALET WPVELFERLL PRHLEIIYRI NAQHLALAEQ RAPGDIEYRA
SVSLIDEKSG RRVRMGQLAF VGSHRINGVS AMHSDLMKET VFHDLNHLYP GRITNKTNGI
TFRRWLTLAN PKLTSLLCEA CGDAIVDDPT LLSSLESYVA DSGFQQKFRA VKRHNKLQLA
RLIGERMNVR IDPGALFDVQ IKRIHEYKRQ LLNILEAIAL YQDIKDNPQA DWVPRVKIFA
GKAAASYRYA KLIIKLINDV AELVNNDPAI DGRLKVVFLA DYNVSLAEAI IPAADLSEQI
STAGMEASGT GNMKLALNGA ITIGTLDGAN IEIRDNVGAD NIAIFGMEAD DVMLRRKQGL
DATDVIRRSP RLARAIDAIA SGLFSPGEPG RFEPIAHALR HLDHYMVSAD FDSYYEAQRG
VDARWRTAPA WTRASILNVA RMAWFSSDRT IREYADDIWN VPVGPIQAPA HARRA
|
|---|
| |